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\ No newline at end of file diff --git a/MANIFEST.in b/MANIFEST.in deleted file mode 100644 index 834544f..0000000 --- a/MANIFEST.in +++ /dev/null @@ -1,2 +0,0 @@ -include LICENSE -recursive-include . *.py *.md *.pdf *.obj *.blend *.json
\ No newline at end of file diff --git a/docs/contributor_guide/build_package.md b/docs/contributor_guide/build_package.md new file mode 100644 index 0000000..fae1730 --- /dev/null +++ b/docs/contributor_guide/build_package.md @@ -0,0 +1,36 @@ +Build package +============= + +ArGaze build system is based on [setuptools](https://setuptools.pypa.io/en/latest/userguide/index.html) and [setuptools-scm](https://setuptools-scm.readthedocs.io/en/latest/) to use Git tag as package version number. + +!!! note + + *Consider that all inline commands below have to be executed at the root of ArGaze Git repository.* + +Install or upgrade the required packages: + +```console +pip install build setuptools setuptools-scm +``` + +Commit last changes then, tag the Git repository with a VERSION that follows the [setuptools versionning schemes](https://setuptools.pypa.io/en/latest/userguide/distribution.html): + +```console +git tag -a VERSION -m "Version message" +``` + +Push commits and tags: + +```console +git push && git push --tags +``` + +Then, build package: +```console +python -m build +``` + +Once the build is done, two files are created in a *dist* folder: + +* **argaze-VERSION-py3-none-any.whl**: the built package (*none* means for no specific OS, *any* means for any architecture). +* **argaze-VERSION.tar.gz**: the source package. diff --git a/docs/img/4flight_visual_pattern.png b/docs/img/4flight_visual_pattern.png Binary files differnew file mode 100644 index 0000000..0550063 --- /dev/null +++ b/docs/img/4flight_visual_pattern.png diff --git a/docs/img/4flight_workspace.png b/docs/img/4flight_workspace.png Binary files differnew file mode 100644 index 0000000..f899ab2 --- /dev/null +++ b/docs/img/4flight_workspace.png diff --git a/docs/img/argaze_load_gui.png b/docs/img/argaze_load_gui.png Binary files differindex b8874b2..e012adc 100644 --- a/docs/img/argaze_load_gui.png +++ b/docs/img/argaze_load_gui.png diff --git a/docs/img/argaze_load_gui_haiku.png b/docs/img/argaze_load_gui_haiku.png Binary files differnew file mode 100644 index 0000000..6a4e1ec --- /dev/null +++ b/docs/img/argaze_load_gui_haiku.png diff --git a/docs/img/argaze_load_gui_pfe.png b/docs/img/argaze_load_gui_pfe.png Binary files differnew file mode 100644 index 0000000..0e622d3 --- /dev/null +++ b/docs/img/argaze_load_gui_pfe.png diff --git a/docs/img/argaze_pipeline.png b/docs/img/argaze_pipeline.png Binary files differindex 953cbba..61606b2 100644 --- a/docs/img/argaze_pipeline.png +++ b/docs/img/argaze_pipeline.png diff --git a/docs/index.md b/docs/index.md index 2b668a3..ca9271a 100644 --- a/docs/index.md +++ b/docs/index.md @@ -14,7 +14,7 @@ By offering a wide array of gaze metrics and supporting easy extension to incorp ## Eye tracking context -**ArGaze** facilitates the integration of both **screen-based and head-mounted** eye tracking systems for **real-time and/or post-processing analysis**. +**ArGaze** facilitates the integration of both **screen-based and head-mounted** eye tracking systems for **live data capture and afterward data playback**. [Learn how to handle various eye tracking context by reading the dedicated user guide section](./user_guide/eye_tracking_context/introduction.md). diff --git a/docs/installation.md b/docs/installation.md index 66b801b..fe4cfa4 100644 --- a/docs/installation.md +++ b/docs/installation.md @@ -37,8 +37,8 @@ pip install ./dist/argaze-VERSION.whl !!! note "As ArGaze package contributor" - *You should prefer to install the package in developer mode to test live code changes:* + *You should prefer to install the package in editable mode to test live code changes:* ``` - pip install -e . + pip install --editable . ``` diff --git a/docs/use_cases/air_controller_gaze_study/context.md b/docs/use_cases/air_controller_gaze_study/context.md new file mode 100644 index 0000000..8bb4ef8 --- /dev/null +++ b/docs/use_cases/air_controller_gaze_study/context.md @@ -0,0 +1,22 @@ +Data playback context +====================== + +The context handles incoming eye tracker data before to pass them to a processing pipeline. + +## data_playback_context.json + +For this use case we need to read Tobii Pro Glasses 2 records: **ArGaze** provides a [ready-made context](../../user_guide/eye_tracking_context/context_modules/tobii_pro_glasses_2.md) class to playback data from records made by this device. + +While *segment* entry is specific to the [TobiiProGlasses2.SegmentPlayback](../../argaze.md/#argaze.utils.contexts.TobiiProGlasses2.SegmentPlayback) class, *name* and *pipeline* entries are part of the parent [ArContext](../../argaze.md/#argaze.ArFeatures.ArContext) class. + +```json +{ + "argaze.utils.contexts.TobiiProGlasses2.SegmentPlayback": { + "name": "Tobii Pro Glasses 2 segment playback", + "segment": "/Volumes/projects/fbr6k3e/records/4rcbdzk/segments/1", + "pipeline": "post_processing_pipeline.json" + } +} +``` + +The [post_processing_pipeline.json](pipeline.md) file mentioned above is described in the next chapter. diff --git a/docs/use_cases/air_controller_gaze_study/introduction.md b/docs/use_cases/air_controller_gaze_study/introduction.md new file mode 100644 index 0000000..f188eec --- /dev/null +++ b/docs/use_cases/air_controller_gaze_study/introduction.md @@ -0,0 +1,48 @@ +Post-processing head-mounted eye tracking records +================================================= + +**ArGaze** enabled a study of air traffic controller gaze strategy. + +The following use case has integrated the [ArUco marker pipeline](../../user_guide/aruco_marker_pipeline/introduction.md) to map air traffic controllers gaze onto multiple screens environment in post-processing then, enable scan path study using the [gaze analysis pipeline](../../user_guide/gaze_analysis_pipeline/introduction.md). + +## Background + +The next-gen air traffic control system (4Flight) aims to enhance the operational capacity of the en-route control center by offering new tools to air traffic controllers. However, it entails significant changes in their working method, which will consequently have an impact on how they are trained. +Several research projects on visual patterns of air traffic controllers indicate the urgent need to improve the effectiveness of training in visual information seeking behavior. +An exploratory study was initiated by a group of trainee air traffic controllers with the aim of analyzing the visual patterns of novice controllers and instructors, intending to propose guidelines regarding the visual pattern for training. + +## Environment + +The 4Flight control position consists of two screens: the first displays the radar image along with other information regarding the observed sector, the second displays the agenda, which allows the controller to link conflicting aircraft by creating data blocks, and the Dyp info, which displays some information about the flight. +During their training, controllers are taught to visually follow all aircraft streams along a given route, focusing on their planned flight path and potential interactions with other aircraft. + + + +A traffic simulation of moderate difficulty with a maximum of 13 and 16 aircraft simultaneously was performed by air traffic controllers. The controller could encounter lateral conflicts (same altitude) between 2 and 3 aircraft and conflicts between aircraft that need to ascend or descend within the sector. +After the simulation, a directed interview about the gaze pattern was conducted. +Eye tracking data was recorded with a Tobii Pro Glasses 2, a head-mounted eye tracker. +The gaze and scene camera video were captured with Tobii Pro Lab software and post-processed with **ArGaze** software library. +As the eye tracker model is head mounted, ArUco markers were placed around the two screens to ensure that several of them were always visible in the field of view of the eye tracker camera. + +Various metrics were exported with specific pipeline observers, including average fixation duration, explore/exploit ratio, K-coefficient, AOI distribution, transition matrix, entropy and N-grams. +Although statistical analysis is not possible due to the small sample size of the study (6 instructors, 5 qualified controllers, and 5 trainees), visual pattern summaries have been manually built from transition matrix export to produce a qualitative interpretation showing what instructors attend during training and how qualified controllers work. Red arcs are more frequent than the blue ones. Instructors (Fig. a) and four different qualified controllers (Fig. b, c, d, e). + + + +## Setup + +The setup to integrate **ArGaze** to the experiment is defined by 3 main files detailled in the next chapters: + +* The context file that playback gaze data and scene camera video records: [data_playback_context.json](context.md) +* The pipeline file that processes gaze data and scene camera video: [post_processing_pipeline.json](pipeline.md) +* The observers file that exports analysis outputs: [observers.py](observers.md) + +As any **ArGaze** setup, it is loaded by executing the [*load* command](../../user_guide/utils/main_commands.md): + +```shell +python -m argaze load segment_playback_context.json +``` + +This command opens one GUI window per frame (one for the scene camera, one for the sector screen and one for the info screen) that allow to monitor gaze mapping while processing. + + diff --git a/docs/use_cases/air_controller_gaze_study/observers.md b/docs/use_cases/air_controller_gaze_study/observers.md new file mode 100644 index 0000000..500d573 --- /dev/null +++ b/docs/use_cases/air_controller_gaze_study/observers.md @@ -0,0 +1,90 @@ +Metrics and video recording +=========================== + +Observers are attached to pipeline steps to be notified when a method is called. + +## observers.py + +For this use case we need to record gaze analysis metrics on *ArUcoCamera.on_look* call and to record sector screen image on *ArUcoCamera.on_copy_background_into_scenes_frames* signal. + +```python +import logging + +from argaze.utils import UtilsFeatures + +import cv2 + +class ScanPathAnalysisRecorder(UtilsFeatures.FileWriter): + + def __init__(self, **kwargs): + + super().__init__(**kwargs) + + self.header = "Timestamp (ms)", "Path duration (ms)", "Steps number", "Fixation durations average (ms)", "Explore/Exploit ratio", "K coefficient" + + def on_look(self, timestamp, frame, exception): + """Log scan path metrics.""" + + if frame.is_analysis_available(): + + analysis = frame.analysis() + + data = ( + int(timestamp), + analysis['argaze.GazeAnalysis.Basic.ScanPathAnalyzer'].path_duration, + analysis['argaze.GazeAnalysis.Basic.ScanPathAnalyzer'].steps_number, + analysis['argaze.GazeAnalysis.Basic.ScanPathAnalyzer'].step_fixation_durations_average, + analysis['argaze.GazeAnalysis.ExploreExploitRatio.ScanPathAnalyzer'].explore_exploit_ratio, + analysis['argaze.GazeAnalysis.KCoefficient.ScanPathAnalyzer'].K + ) + + self.write(data) + +class AOIScanPathAnalysisRecorder(UtilsFeatures.FileWriter): + + def __init__(self, **kwargs): + + super().__init__(**kwargs) + + self.header = "Timestamp (ms)", "Path duration (ms)", "Steps number", "Fixation durations average (ms)", "Transition matrix probabilities", "Transition matrix density", "N-Grams count", "Stationary entropy", "Transition entropy" + + def on_look(self, timestamp, layer, exception): + """Log aoi scan path metrics""" + + if layer.is_analysis_available(): + + analysis = layer.analysis() + + data = ( + int(timestamp), + analysis['argaze.GazeAnalysis.Basic.AOIScanPathAnalyzer'].path_duration, + analysis['argaze.GazeAnalysis.Basic.AOIScanPathAnalyzer'].steps_number, + analysis['argaze.GazeAnalysis.Basic.AOIScanPathAnalyzer'].step_fixation_durations_average, + analysis['argaze.GazeAnalysis.TransitionMatrix.AOIScanPathAnalyzer'].transition_matrix_probabilities, + analysis['argaze.GazeAnalysis.TransitionMatrix.AOIScanPathAnalyzer'].transition_matrix_density, + analysis['argaze.GazeAnalysis.NGram.AOIScanPathAnalyzer'].ngrams_count, + analysis['argaze.GazeAnalysis.Entropy.AOIScanPathAnalyzer'].stationary_entropy, + analysis['argaze.GazeAnalysis.Entropy.AOIScanPathAnalyzer'].transition_entropy + ) + + self.write(data) + +class VideoRecorder(UtilsFeatures.VideoWriter): + + def __init__(self, **kwargs): + + super().__init__(**kwargs) + + def on_copy_background_into_scenes_frames(self, timestamp, frame, exception): + """Write frame image.""" + + logging.debug('VideoRecorder.on_map') + + image = frame.image() + + # Write video timing + cv2.rectangle(image, (0, 0), (550, 50), (63, 63, 63), -1) + cv2.putText(image, f'Time: {int(timestamp)} ms', (20, 40), cv2.FONT_HERSHEY_SIMPLEX, 1, (255, 255, 255), 1, cv2.LINE_AA) + + self.write(image) +``` diff --git a/docs/use_cases/air_controller_gaze_study/pipeline.md b/docs/use_cases/air_controller_gaze_study/pipeline.md new file mode 100644 index 0000000..69fdd2c --- /dev/null +++ b/docs/use_cases/air_controller_gaze_study/pipeline.md @@ -0,0 +1,366 @@ +Post processing pipeline +======================== + +The pipeline processes camera image and gaze data to enable gaze mapping and gaze analysis. + +## post_processing_pipeline.json + +For this use case we need to detect ArUco markers to enable gaze mapping: **ArGaze** provides the [ArUcoCamera](../../argaze.md/#argaze.ArUcoMarker.ArUcoCamera) class to setup an [ArUco markers pipeline](../../user_guide/aruco_marker_pipeline/introduction.md). + +```json +{ + "argaze.ArUcoMarker.ArUcoCamera.ArUcoCamera": { + "name": "ATC_Study", + "size": [1920, 1080], + "sides_mask": 420, + "copy_background_into_scenes_frames": true, + "aruco_detector": { + "dictionary": "DICT_APRILTAG_16h5", + "optic_parameters": "optic_parameters.json", + "parameters": { + "adaptiveThreshConstant": 20, + "useAruco3Detection": true + } + }, + "gaze_movement_identifier": { + "argaze.GazeAnalysis.DispersionThresholdIdentification.GazeMovementIdentifier": { + "deviation_max_threshold": 25, + "duration_min_threshold": 150 + } + }, + "layers": { + "Main" : { + "aoi_matcher": { + "argaze.GazeAnalysis.DeviationCircleCoverage.AOIMatcher": { + "coverage_threshold": 0.5 + } + }, + "aoi_scan_path" : { + "duration_max": 60000 + }, + "aoi_scan_path_analyzers": { + "argaze.GazeAnalysis.Basic.AOIScanPathAnalyzer": {}, + "argaze.GazeAnalysis.TransitionMatrix.AOIScanPathAnalyzer": {}, + "argaze.GazeAnalysis.NGram.AOIScanPathAnalyzer": { + "n_min": 3, + "n_max": 5 + }, + "argaze.GazeAnalysis.Entropy.AOIScanPathAnalyzer": {} + }, + "observers": { + "observers.AOIScanPathAnalysisRecorder": { + "path": "aoi_metrics.csv" + } + } + } + }, + "image_parameters": { + "background_weight": 1, + "draw_gaze_positions": { + "color": [0, 255, 255], + "size": 4 + }, + "draw_detected_markers": { + "color": [0, 255, 0] + }, + "draw_layers": { + "Main": { + "draw_aoi_scene": { + "draw_aoi": { + "color": [255, 255, 255], + "border_size": 1 + } + }, + "draw_aoi_matching": { + "update_looked_aoi": true, + "draw_looked_aoi": { + "color": [0, 255, 0], + "border_size": 2 + }, + "looked_aoi_name_color": [255, 255, 255], + "looked_aoi_name_offset": [0, -10] + } + } + } + }, + "scenes": { + "Workspace": { + "aruco_markers_group": "workspace_markers.obj", + "layers": { + "Main" : { + "aoi_scene": "workspace_aois.obj" + } + }, + "frames": { + "Sector_Screen": { + "size": [1080, 1017], + "gaze_movement_identifier": { + "argaze.GazeAnalysis.DispersionThresholdIdentification.GazeMovementIdentifier": { + "deviation_max_threshold": 25, + "duration_min_threshold": 150 + } + }, + "scan_path": { + "duration_max": 30000 + }, + "scan_path_analyzers": { + "argaze.GazeAnalysis.Basic.ScanPathAnalyzer": {}, + "argaze.GazeAnalysis.ExploreExploitRatio.ScanPathAnalyzer": { + "short_fixation_duration_threshold": 0 + }, + "argaze.GazeAnalysis.KCoefficient.ScanPathAnalyzer": {} + }, + "layers" :{ + "Main": { + "aoi_scene": "sector_screen_aois.svg" + } + }, + "heatmap": { + "size": [80, 60] + }, + "image_parameters": { + "background_weight": 1, + "heatmap_weight": 0.5, + "draw_gaze_positions": { + "color": [0, 127, 127], + "size": 4 + }, + "draw_scan_path": { + "draw_fixations": { + "deviation_circle_color": [255, 255, 255], + "duration_border_color": [0, 127, 127], + "duration_factor": 1e-2 + }, + "draw_saccades": { + "line_color": [0, 255, 255] + }, + "deepness": 0 + }, + "draw_layers": { + "Main": { + "draw_aoi_scene": { + "draw_aoi": { + "color": [255, 255, 255], + "border_size": 1 + } + }, + "draw_aoi_matching": { + "draw_matched_fixation": { + "deviation_circle_color": [255, 255, 255], + "draw_positions": { + "position_color": [0, 255, 0], + "line_color": [0, 0, 0] + } + }, + "draw_looked_aoi": { + "color": [0, 255, 0], + "border_size": 2 + }, + "looked_aoi_name_color": [255, 255, 255], + "looked_aoi_name_offset": [10, 10] + } + } + } + }, + "observers": { + "observers.ScanPathAnalysisRecorder": { + "path": "sector_screen.csv" + }, + "observers.VideoRecorder": { + "path": "sector_screen.mp4", + "width": 1080, + "height": 1024, + "fps": 25 + } + } + }, + "Info_Screen": { + "size": [640, 1080], + "layers" : { + "Main": { + "aoi_scene": "info_screen_aois.svg" + } + } + } + } + } + }, + "observers": { + "argaze.utils.UtilsFeatures.LookPerformanceRecorder": { + "path": "look_performance.csv" + }, + "argaze.utils.UtilsFeatures.WatchPerformanceRecorder": { + "path": "watch_performance.csv" + } + } + } +} +``` + +All the files mentioned above are described below. + +The *ScanPathAnalysisRecorder* and *AOIScanPathAnalysisRecorder* observers objects are defined into the [observers.py](observers.md) file that is described in the next chapter. + +## optic_parameters.json + +This file defines the Tobii Pro glasses 2 scene camera optic parameters which has been calculated as explained into [the camera calibration chapter](../../user_guide/aruco_marker_pipeline/advanced_topics/optic_parameters_calibration.md). + +```json +{ + "rms": 0.6688921504088245, + "dimensions": [ + 1920, + 1080 + ], + "K": [ + [ + 1135.6524381415752, + 0.0, + 956.0685325355497 + ], + [ + 0.0, + 1135.9272506869524, + 560.059099810324 + ], + [ + 0.0, + 0.0, + 1.0 + ] + ], + "D": [ + 0.01655492265003404, + 0.1985524264972037, + 0.002129965902489484, + -0.0019528582922179365, + -0.5792910353639452 + ] +} +``` + +## workspace_markers.obj + +This file defines the place where are the ArUco markers into the workspace geometry. Markers' positions have been edited in Blender software from a 3D model of the workspace built manually then exported at OBJ format. + +```obj +# Blender v3.0.1 OBJ File: 'workspace.blend' +# www.blender.org +o DICT_APRILTAG_16h5#1_Marker +v -2.532475 48.421242 0.081627 +v 2.467094 48.355682 0.077174 +v 2.532476 53.352734 -0.081634 +v -2.467093 53.418293 -0.077182 +s off +f 1 2 3 4 +o DICT_APRILTAG_16h5#6_Marker +v 88.144676 23.084166 -0.070246 +v 93.144661 23.094980 -0.072225 +v 93.133904 28.092941 0.070232 +v 88.133919 28.082127 0.072211 +s off +f 5 6 7 8 +o DICT_APRILTAG_16h5#2_Marker +v -6.234516 27.087950 0.176944 +v -1.244015 27.005413 -0.119848 +v -1.164732 32.004459 -0.176936 +v -6.155232 32.086998 0.119855 +s off +f 9 10 11 12 +o DICT_APRILTAG_16h5#3_Marker +v -2.518053 -2.481743 -0.018721 +v 2.481756 -2.518108 0.005601 +v 2.518059 2.481743 0.018721 +v -2.481749 2.518108 -0.005601 +s off +f 13 14 15 16 +o DICT_APRILTAG_16h5#5_Marker +v 48.746418 48.319012 -0.015691 +v 53.746052 48.374046 0.009490 +v 53.690983 53.373741 0.015698 +v 48.691349 53.318699 -0.009490 +s off +f 17 18 19 20 +o DICT_APRILTAG_16h5#4_Marker +v 23.331947 -3.018721 5.481743 +v 28.331757 -2.994399 5.518108 +v 28.368059 -2.981279 0.518257 +v 23.368252 -3.005600 0.481892 +s off +f 21 22 23 24 + +``` + +## workspace_aois.obj + +This file defines the place of the AOI into the workspace geometry. AOI positions have been edited in [Blender software](https://www.blender.org/) from a 3D model of the workspace built manually then exported at OBJ format. + +```obj +# Blender v3.0.1 OBJ File: 'workspace.blend' +# www.blender.org +o Sector_Screen +v 0.000000 1.008786 0.000000 +v 51.742416 1.008786 0.000000 +v 0.000000 52.998108 0.000000 +v 51.742416 52.998108 0.000000 +s off +f 1 2 4 3 +o Info_Screen +v 56.407101 0.000000 0.000000 +v 91.407104 0.000000 0.000000 +v 56.407101 52.499996 0.000000 +v 91.407104 52.499996 0.000000 +s off +f 5 6 8 7 + +``` + +## sector_screen_aois.svg + +This file defines the place of the AOI into the sector screen frame. AOI positions have been edited [Inkscape software](https://inkscape.org/fr/) from a screenshot of the sector screen then exported at SVG format. + +```svg +<svg > + <path id="Area_1" d="M317.844,198.526L507.431,426.837L306.453,595.073L110.442,355.41L317.844,198.526Z"/> + <path id="Area_2" d="M507.431,426.837L611.554,563.624L444.207,750.877L306.453,595.073L507.431,426.837Z"/> + <path id="Area_3" d="M395.175,1017L444.207,750.877L611.554,563.624L1080,954.462L1080,1017L395.175,1017Z"/> + <path id="Area_4" d="M611.554,563.624L756.528,293.236L562.239,198.526L471.45,382.082L611.554,563.624Z"/> + <path id="Area_5" d="M0,900.683L306.453,595.073L444.207,750.877L395.175,1017L0,1017L0,900.683Z"/> + <path id="Area_6" d="M471.45,381.938L557.227,207.284L354.832,65.656L237.257,104.014L471.45,381.938Z"/> + <path id="Area_7" d="M0,22.399L264.521,24.165L318.672,77.325L237.257,103.625L248.645,118.901L0,80.963L0,22.399Z"/> +</svg> +``` + +## info_screen_aois.svg + +This file defines the place of the AOI into the info screen frame. AOI positions have been edited [Inkscape software](https://inkscape.org/fr/) from a screenshot of the info screen then exported at SVG format. + +```svg +<svg > + <rect id="Strips" x="0" y="880" width="640" height="200"/> +</svg> +``` + +## aoi_metrics.csv + +The file contains all the metrics recorded by the *AOIScanPathAnalysisRecorder* objects as defined into the [observers.py](observers.md) file. + +## sector_screen.csv + +The file contains all the metrics recorded by the *ScanPathAnalysisRecorder* objects as defined into the [observers.py](observers.md) file. + +## sector_screen.mp4 + +The video file is a record of the sector screen frame image. + +## look_performance.csv + +This file contains the logs of *ArUcoCamera.look* method execution info. It is created into the folder where the [*load* command](../../user_guide/utils/main_commands.md) is launched. + +On a MacBookPro (2.3GHz Intel Core i9 8 cores), the *look* method execution time is ~1ms and it is called ~51 times per second. + +## watch_performance.csv + +This file contains the logs of *ArUcoCamera.watch* method execution info. It is created into the folder from where the [*load* command](../../user_guide/utils/main_commands.md) is launched. + +On a MacBookPro (2.3GHz Intel Core i9 8 cores) without CUDA acceleration, the *watch* method execution time is ~52ms and it is called more than 12 times per second. diff --git a/docs/use_cases/gaze_based_candidate_selection/context.md b/docs/use_cases/gaze_based_candidate_selection/context.md new file mode 100644 index 0000000..96547ea --- /dev/null +++ b/docs/use_cases/gaze_based_candidate_selection/context.md @@ -0,0 +1,7 @@ +Data playback context +====================== + +The context handles incoming eye tracker data before to pass them to a processing pipeline. + +## data_playback_context.json + diff --git a/docs/use_cases/gaze_based_candidate_selection/introduction.md b/docs/use_cases/gaze_based_candidate_selection/introduction.md new file mode 100644 index 0000000..da8d6f9 --- /dev/null +++ b/docs/use_cases/gaze_based_candidate_selection/introduction.md @@ -0,0 +1,12 @@ +Post-processing screen-based eye tracker data +================================================= + +**ArGaze** enabled ... + +The following use case has integrated ... + +## Background + +## Environment + +## Setup diff --git a/docs/use_cases/gaze_based_candidate_selection/observers.md b/docs/use_cases/gaze_based_candidate_selection/observers.md new file mode 100644 index 0000000..a1f1fce --- /dev/null +++ b/docs/use_cases/gaze_based_candidate_selection/observers.md @@ -0,0 +1,6 @@ +Metrics and video recording +=========================== + +Observers are attached to pipeline steps to be notified when a method is called. + +## observers.py diff --git a/docs/use_cases/gaze_based_candidate_selection/pipeline.md b/docs/use_cases/gaze_based_candidate_selection/pipeline.md new file mode 100644 index 0000000..6fae01a --- /dev/null +++ b/docs/use_cases/gaze_based_candidate_selection/pipeline.md @@ -0,0 +1,6 @@ +Post processing pipeline +======================== + +The pipeline processes gaze data to enable gaze analysis. + +## post_processing_pipeline.json diff --git a/docs/use_cases/pilot_gaze_monitoring/context.md b/docs/use_cases/pilot_gaze_tracking/context.md index 417ed13..8839cb6 100644 --- a/docs/use_cases/pilot_gaze_monitoring/context.md +++ b/docs/use_cases/pilot_gaze_tracking/context.md @@ -1,12 +1,11 @@ -Live streaming context -====================== +Data capture context +==================== -The context handles pipeline inputs. +The context handles incoming eye tracker data before to pass them to a processing pipeline. ## live_streaming_context.json -For this use case we need to connect to a Tobii Pro Glasses 2 device. -**ArGaze** provides a context class to live stream data from this device. +For this use case we need to connect to a Tobii Pro Glasses 2 device: **ArGaze** provides a [ready-made context](../../user_guide/eye_tracking_context/context_modules/tobii_pro_glasses_2.md) class to capture data from this device. While *address*, *project*, *participant* and *configuration* entries are specific to the [TobiiProGlasses2.LiveStream](../../argaze.md/#argaze.utils.contexts.TobiiProGlasses2.LiveStream) class, *name*, *pipeline* and *observers* entries are part of the parent [ArContext](../../argaze.md/#argaze.ArFeatures.ArContext) class. @@ -37,6 +36,6 @@ While *address*, *project*, *participant* and *configuration* entries are specif } ``` -The [live_processing_pipeline.json](pipeline.md) file mentioned aboved is described in the next chapter. +The [live_processing_pipeline.json](pipeline.md) file mentioned above is described in the next chapter. -The observers objects are defined into the [observers.py](observers.md) file that is described in a next chapter.
\ No newline at end of file +The *IvyBus* observer object is defined into the [observers.py](observers.md) file that is described in a next chapter.
\ No newline at end of file diff --git a/docs/use_cases/pilot_gaze_monitoring/introduction.md b/docs/use_cases/pilot_gaze_tracking/introduction.md index 453a443..7e88c69 100644 --- a/docs/use_cases/pilot_gaze_monitoring/introduction.md +++ b/docs/use_cases/pilot_gaze_tracking/introduction.md @@ -30,17 +30,18 @@ Finally, fixation events were sent in real-time through [Ivy bus middleware](htt ## Setup -The setup to integrate **ArGaze** to the experiment is defined by 3 main files: +The setup to integrate **ArGaze** to the experiment is defined by 3 main files detailled in the next chapters: * The context file that captures gaze data and scene camera video: [live_streaming_context.json](context.md) * The pipeline file that processes gaze data and scene camera video: [live_processing_pipeline.json](pipeline.md) * The observers file that send fixation events via Ivy bus middleware: [observers.py](observers.md) -As any **ArGaze** setup, it is loaded by executing the following command: +As any **ArGaze** setup, it is loaded by executing the [*load* command](../../user_guide/utils/main_commands.md): ```shell python -m argaze load live_streaming_context.json ``` -## Performance +This command opens a GUI window that allows to start gaze calibration, to launch recording and to monitor gaze mapping. Another window is also opened to display gaze mapping onto PFD screen. + diff --git a/docs/use_cases/pilot_gaze_monitoring/observers.md b/docs/use_cases/pilot_gaze_tracking/observers.md index 2e3f394..5f5bc78 100644 --- a/docs/use_cases/pilot_gaze_monitoring/observers.md +++ b/docs/use_cases/pilot_gaze_tracking/observers.md @@ -1,8 +1,12 @@ Fixation events sending ======================= +Observers are attached to pipeline steps to be notified when a method is called. + ## observers.py +For this use case we need to enable [Ivy bus communication](https://gitlab.com/ivybus/ivy-python/) to log ArUco detection results (on *ArUcoCamera.on_watch* call) and fixation identification with AOI matching (on *ArUcoCamera.on_look* call). + ```python import logging diff --git a/docs/use_cases/pilot_gaze_monitoring/pipeline.md b/docs/use_cases/pilot_gaze_tracking/pipeline.md index 8f8dad0..65fccc3 100644 --- a/docs/use_cases/pilot_gaze_monitoring/pipeline.md +++ b/docs/use_cases/pilot_gaze_tracking/pipeline.md @@ -5,8 +5,7 @@ The pipeline processes camera image and gaze data to enable gaze mapping and gaz ## live_processing_pipeline.json -For this use case we need to detect ArUco markers to enable gaze mapping. -**ArGaze** provides the [ArUcoCamera](../../argaze.md/#argaze.ArUcoMarker.ArUcoCamera) class to setup an [ArUco markers pipeline](../../user_guide/aruco_marker_pipeline/introduction.md). +For this use case we need to detect ArUco markers to enable gaze mapping: **ArGaze** provides the [ArUcoCamera](../../argaze.md/#argaze.ArUcoMarker.ArUcoCamera) class to setup an [ArUco markers pipeline](../../user_guide/aruco_marker_pipeline/introduction.md). ```json { @@ -37,12 +36,6 @@ For this use case we need to detect ArUco markers to enable gaze mapping. "PIC_PFD": { "size": [960, 1080], "background": "PIC_PFD.png", - "gaze_movement_identifier": { - "argaze.GazeAnalysis.DispersionThresholdIdentification.GazeMovementIdentifier": { - "deviation_max_threshold": 50, - "duration_min_threshold": 150 - } - }, "layers": { "Main": { "aoi_scene": "PIC_PFD.svg" @@ -56,9 +49,7 @@ For this use case we need to detect ArUco markers to enable gaze mapping. } } } - }, - "angle_tolerance": 15.0, - "distance_tolerance": 10.0 + } } }, "layers": { @@ -119,18 +110,26 @@ For this use case we need to detect ArUco markers to enable gaze mapping. } }, "observers": { - "observers.ArUcoCameraLogger": {} + "observers.ArUcoCameraLogger": {}, + "argaze.utils.UtilsFeatures.LookPerformanceRecorder": { + "path": "_export/look_performance.csv" + }, + "argaze.utils.UtilsFeatures.WatchPerformanceRecorder": { + "path": "_export/watch_performance.csv" + } } } } ``` -All the files mentioned aboved are described below. +All the files mentioned above are described below. -The observers objects are defined into the [observers.py](observers.md) file that is described in the next chapter. +The *ArUcoCameraLogger* observer object is defined into the [observers.py](observers.md) file that is described in the next chapter. ## optic_parameters.json +This file defines the Tobii Pro glasses 2 scene camera optic parameters which has been calculated as explained into [the camera calibration chapter](../../user_guide/aruco_marker_pipeline/advanced_topics/optic_parameters_calibration.md). + ```json { "rms": 0.6688921504088245, @@ -167,15 +166,19 @@ The observers objects are defined into the [observers.py](observers.md) file tha ## detector_parameters.json +This file defines the ArUco detector parameters as explained into [the detection improvement chapter](../../user_guide/aruco_marker_pipeline/advanced_topics/aruco_detector_configuration.md). + ```json { "adaptiveThreshConstant": 7, - "useAruco3Detection": 1 + "useAruco3Detection": true } ``` ## aruco_scene.obj +This file defines the place where are the ArUco markers into the cockpit geometry. Markers' positions have been edited in Blender software from a 3D scan of the cockpit then exported at OBJ format. + ```obj # Blender v3.0.1 OBJ File: 'scene.blend' # www.blender.org @@ -239,6 +242,8 @@ f 29 30 32 31 ## Cockpit.obj +This file defines the place of the AOI into the cockpit geometry. AOI positions have been edited in [Blender software](https://www.blender.org/) from a 3D scan of the cockpit then exported at OBJ format. + ```obj # Blender v3.0.1 OBJ File: 'scene.blend' # www.blender.org @@ -274,10 +279,14 @@ f 13 14 16 15 ## PIC_PFD.png +This file is a screenshot of the PFD screen used to monitor where the gaze is projected after gaze mapping processing. +  ## PIC_PFD.svg +This file defines the place of the AOI into the PFD frame. AOI positions have been edited with [Inkscape software](https://inkscape.org/fr/) from a screenshot of the PFD screen then exported at SVG format. + ```svg <svg> <rect id="PIC_PFD_Air_Speed" x="93.228" y="193.217" width="135.445" height="571.812"/> @@ -288,3 +297,15 @@ f 13 14 16 15 <rect id="PIC_PFD_Vertical_Speed" x="819.913" y="193.217" width="85.185" height="609.09"/> </svg> ``` + +## look_performance.csv + +This file contains the logs of *ArUcoCamera.look* method execution info. It is saved into an *_export* folder from where the [*load* command](../../user_guide/utils/main_commands.md) is launched. + +On a Jetson Xavier computer, the *look* method execution time is 5.7ms and it is called ~100 times per second. + +## watch_performance.csv + +This file contains the logs of *ArUcoCamera.watch* method execution info. It is saved into an *_export* folder from where the [*load* command](../../user_guide/utils/main_commands.md) is launched. + +On a Jetson Xavier computer with CUDA acceleration, the *watch* method execution time is 46.5ms and it is called more than 12 times per second. diff --git a/docs/user_guide/aruco_marker_pipeline/advanced_topics/aruco_detector_configuration.md b/docs/user_guide/aruco_marker_pipeline/advanced_topics/aruco_detector_configuration.md index 975f278..311916b 100644 --- a/docs/user_guide/aruco_marker_pipeline/advanced_topics/aruco_detector_configuration.md +++ b/docs/user_guide/aruco_marker_pipeline/advanced_topics/aruco_detector_configuration.md @@ -5,7 +5,7 @@ As explain in the [OpenCV ArUco documentation](https://docs.opencv.org/4.x/d1/dc ## Load ArUcoDetector parameters -[ArUcoCamera.detector.parameters](../../../argaze.md/#argaze.ArUcoMarker.ArUcoDetector.Parameters) can be loaded thanks to a dedicated JSON entry. +[ArUcoCamera.detector.parameters](../../../argaze.md/#argaze.ArUcoMarker.ArUcoDetector.Parameters) can be loaded with a dedicated JSON entry. Here is an extract from the JSON [ArUcoCamera](../../../argaze.md/#argaze.ArUcoMarker.ArUcoCamera) configuration file with ArUco detector parameters: @@ -18,7 +18,7 @@ Here is an extract from the JSON [ArUcoCamera](../../../argaze.md/#argaze.ArUcoM "dictionary": "DICT_APRILTAG_16h5", "parameters": { "adaptiveThreshConstant": 10, - "useAruco3Detection": 1 + "useAruco3Detection": true } }, ... diff --git a/docs/user_guide/aruco_marker_pipeline/advanced_topics/optic_parameters_calibration.md b/docs/user_guide/aruco_marker_pipeline/advanced_topics/optic_parameters_calibration.md index 625f257..e9ce740 100644 --- a/docs/user_guide/aruco_marker_pipeline/advanced_topics/optic_parameters_calibration.md +++ b/docs/user_guide/aruco_marker_pipeline/advanced_topics/optic_parameters_calibration.md @@ -134,7 +134,7 @@ Below, an optic_parameters JSON file example: ## Load and display optic parameters -[ArUcoCamera.detector.optic_parameters](../../../argaze.md/#argaze.ArUcoMarker.ArUcoOpticCalibrator.OpticParameters) can be enabled thanks to a dedicated JSON entry. +[ArUcoCamera.detector.optic_parameters](../../../argaze.md/#argaze.ArUcoMarker.ArUcoOpticCalibrator.OpticParameters) can be enabled with a dedicated JSON entry. Here is an extract from the JSON [ArUcoCamera](../../../argaze.md/#argaze.ArUcoMarker.ArUcoCamera) configuration file where optic parameters are loaded and displayed: diff --git a/docs/user_guide/aruco_marker_pipeline/advanced_topics/scripting.md b/docs/user_guide/aruco_marker_pipeline/advanced_topics/scripting.md index a9d66e9..f258e04 100644 --- a/docs/user_guide/aruco_marker_pipeline/advanced_topics/scripting.md +++ b/docs/user_guide/aruco_marker_pipeline/advanced_topics/scripting.md @@ -150,7 +150,7 @@ Particularly, timestamped gaze positions can be passed one by one to the [ArUcoC ## Setup ArUcoCamera image parameters -Specific [ArUcoCamera.image](../../../argaze.md/#argaze.ArFeatures.ArFrame.image) method parameters can be configured thanks to a Python dictionary. +Specific [ArUcoCamera.image](../../../argaze.md/#argaze.ArFeatures.ArFrame.image) method parameters can be configured with a Python dictionary. ```python # Assuming ArUcoCamera is loaded diff --git a/docs/user_guide/aruco_marker_pipeline/aoi_3d_description.md b/docs/user_guide/aruco_marker_pipeline/aoi_3d_description.md index 46422b8..78a513a 100644 --- a/docs/user_guide/aruco_marker_pipeline/aoi_3d_description.md +++ b/docs/user_guide/aruco_marker_pipeline/aoi_3d_description.md @@ -1,7 +1,7 @@ Describe 3D AOI =============== -Now that the [scene pose is estimated](aruco_marker_description.md) thanks to ArUco markers description, [areas of interest (AOI)](../../argaze.md/#argaze.AreaOfInterest.AOIFeatures.AreaOfInterest) need to be described into the same 3D referential. +Now that the [scene pose is estimated](aruco_marker_description.md) considering the ArUco markers description, [areas of interest (AOI)](../../argaze.md/#argaze.AreaOfInterest.AOIFeatures.AreaOfInterest) need to be described into the same 3D referential. In the example scene, the two screens—the control panel and the window—are considered to be areas of interest. diff --git a/docs/user_guide/aruco_marker_pipeline/configuration_and_execution.md b/docs/user_guide/aruco_marker_pipeline/configuration_and_execution.md index c2ee1b9..56846e2 100644 --- a/docs/user_guide/aruco_marker_pipeline/configuration_and_execution.md +++ b/docs/user_guide/aruco_marker_pipeline/configuration_and_execution.md @@ -1,7 +1,7 @@ Edit and execute pipeline ========================= -Once [ArUco markers are placed into a scene](aruco_marker_description.md), they can be detected thanks to [ArUcoCamera](../../argaze.md/#argaze.ArUcoMarker.ArUcoCamera) class. +Once [ArUco markers are placed into a scene](aruco_marker_description.md), they can be detected by the [ArUcoCamera](../../argaze.md/#argaze.ArUcoMarker.ArUcoCamera) class. As [ArUcoCamera](../../argaze.md/#argaze.ArUcoMarker.ArUcoCamera) inherits from [ArFrame](../../argaze.md/#argaze.ArFeatures.ArFrame), the [ArUcoCamera](../../argaze.md/#argaze.ArUcoMarker.ArUcoCamera) class also benefits from all the services described in the [gaze analysis pipeline section](../gaze_analysis_pipeline/introduction.md). diff --git a/docs/user_guide/eye_tracking_context/advanced_topics/context_definition.md b/docs/user_guide/eye_tracking_context/advanced_topics/context_definition.md index c163696..a543bc7 100644 --- a/docs/user_guide/eye_tracking_context/advanced_topics/context_definition.md +++ b/docs/user_guide/eye_tracking_context/advanced_topics/context_definition.md @@ -3,27 +3,27 @@ Define a context class The [ArContext](../../../argaze.md/#argaze.ArFeatures.ArContext) class defines a generic base class interface to handle incoming eye tracker data before to pass them to a processing pipeline according to [Python context manager feature](https://docs.python.org/3/reference/datamodel.html#context-managers). -The [ArContext](../../../argaze.md/#argaze.ArFeatures.ArContext) class interface provides playback features to stop or pause processings, performance assement features to measure how many times processings are called and the time spent by the process. +The [ArContext](../../../argaze.md/#argaze.ArFeatures.ArContext) class interface provides control features to stop or pause working threads, performance assessment features to measure how many times processings are called and the time spent by the process. -Besides, there is also a [LiveProcessingContext](../../../argaze.md/#argaze.ArFeatures.LiveProcessingContext) class that inherits from [ArContext](../../../argaze.md/#argaze.ArFeatures.ArContext) and that defines an abstract *calibrate* method to write specific device calibration process. +Besides, there is also a [DataCaptureContext](../../../argaze.md/#argaze.ArFeatures.DataCaptureContext) class that inherits from [ArContext](../../../argaze.md/#argaze.ArFeatures.ArContext) and that defines an abstract *calibrate* method to write specific device calibration process. -In the same way, there is a [PostProcessingContext](../../../argaze.md/#argaze.ArFeatures.PostProcessingContext) class that inherits from [ArContext](../../../argaze.md/#argaze.ArFeatures.ArContext) and that defines abstract *previous* and *next* playback methods to move into record's frames and also defines *duration* and *progression* properties to get information about a record length and processing advancement. +In the same way, there is a [DataPlaybackContext](../../../argaze.md/#argaze.ArFeatures.DataPlaybackContext) class that inherits from [ArContext](../../../argaze.md/#argaze.ArFeatures.ArContext) and that defines *duration* and *progression* properties to get information about a record length and playback advancement. -Finally, a specific eye tracking context can be defined into a Python file by writing a class that inherits either from [ArContext](../../../argaze.md/#argaze.ArFeatures.ArContext), [LiveProcessingContext](../../../argaze.md/#argaze.ArFeatures.LiveProcessingContext) or [PostProcessingContext](../../../argaze.md/#argaze.ArFeatures.PostProcessingContext) class. +Finally, a specific eye tracking context can be defined into a Python file by writing a class that inherits either from [ArContext](../../../argaze.md/#argaze.ArFeatures.ArContext), [DataCaptureContext](../../../argaze.md/#argaze.ArFeatures.DataCaptureContext) or [DataPlaybackContext](../../../argaze.md/#argaze.ArFeatures.DataPlaybackContext) class. -## Write live processing context +## Write data capture context -Here is a live processing context example that processes gaze positions and camera images in two separated threads: +Here is a data cpature context example that processes gaze positions and camera images in two separated threads: ```python from argaze import ArFeatures, DataFeatures -class LiveProcessingExample(ArFeatures.LiveProcessingContext): +class DataCaptureExample(ArFeatures.DataCaptureContext): @DataFeatures.PipelineStepInit def __init__(self, **kwargs): - # Init LiveProcessingContext class + # Init DataCaptureContext class super().__init__() # Init private attribute @@ -45,23 +45,23 @@ class LiveProcessingExample(ArFeatures.LiveProcessingContext): # Start context according any specific parameter ... self.parameter - # Start a gaze position processing thread - self.__gaze_thread = threading.Thread(target = self.__gaze_position_processing) + # Start a gaze position capture thread + self.__gaze_thread = threading.Thread(target = self.__gaze_position_capture) self.__gaze_thread.start() - # Start a camera image processing thread if applicable - self.__camera_thread = threading.Thread(target = self.__camera_image_processing) + # Start a camera image capture thread if applicable + self.__camera_thread = threading.Thread(target = self.__camera_image_capture) self.__camera_thread.start() return self - def __gaze_position_processing(self): - """Process gaze position.""" + def __gaze_position_capture(self): + """Capture gaze position.""" - # Processing loop + # Capture loop while self.is_running(): - # Pause processing + # Pause capture if not self.is_paused(): # Assuming that timestamp, x and y values are available @@ -73,13 +73,13 @@ class LiveProcessingExample(ArFeatures.LiveProcessingContext): # Wait some time eventually ... - def __camera_image_processing(self): - """Process camera image if applicable.""" + def __camera_image_capture(self): + """Capture camera image if applicable.""" - # Processing loop + # Capture loop while self.is_running(): - # Pause processing + # Pause capture if not self.is_paused(): # Assuming that timestamp, camera_image are available @@ -95,10 +95,10 @@ class LiveProcessingExample(ArFeatures.LiveProcessingContext): def __exit__(self, exception_type, exception_value, exception_traceback): """End context.""" - # Stop processing loops + # Stop capture loops self.stop() - # Stop processing threads + # Stop capture threads threading.Thread.join(self.__gaze_thread) threading.Thread.join(self.__camera_thread) @@ -108,19 +108,19 @@ class LiveProcessingExample(ArFeatures.LiveProcessingContext): ... ``` -## Write post processing context +## Write data playback context -Here is a post processing context example that processes gaze positions and camera images in a same thread: +Here is a data playback context example that reads gaze positions and camera images in a same thread: ```python from argaze import ArFeatures, DataFeatures -class PostProcessingExample(ArFeatures.PostProcessingContext): +class DataPlaybackExample(ArFeatures.DataPlaybackContext): @DataFeatures.PipelineStepInit def __init__(self, **kwargs): - # Init LiveProcessingContext class + # Init DataCaptureContext class super().__init__() # Init private attribute @@ -142,19 +142,19 @@ class PostProcessingExample(ArFeatures.PostProcessingContext): # Start context according any specific parameter ... self.parameter - # Start a reading data thread - self.__read_thread = threading.Thread(target = self.__data_reading) - self.__read_thread.start() + # Start a data playback thread + self.__data_thread = threading.Thread(target = self.__data_playback) + self.__data_thread.start() return self - def __data_reading(self): - """Process gaze position and camera image if applicable.""" + def __data_playback(self): + """Playback gaze position and camera image if applicable.""" - # Processing loop + # Playback loop while self.is_running(): - # Pause processing + # Pause playback if not self.is_paused(): # Assuming that timestamp, camera_image are available @@ -176,18 +176,20 @@ class PostProcessingExample(ArFeatures.PostProcessingContext): def __exit__(self, exception_type, exception_value, exception_traceback): """End context.""" - # Stop processing loops + # Stop playback loop self.stop() - # Stop processing threads - threading.Thread.join(self.__read_thread) + # Stop playback threads + threading.Thread.join(self.__data_thread) - def previous(self): - """Go to previous camera image frame.""" + @property + def duration(self) -> int|float: + """Get data duration.""" ... - def next(self): - """Go to next camera image frame.""" + @property + def progression(self) -> float: + """Get data playback progression between 0 and 1.""" ... ``` diff --git a/docs/user_guide/eye_tracking_context/advanced_topics/scripting.md b/docs/user_guide/eye_tracking_context/advanced_topics/scripting.md index 8753eb6..d8eb389 100644 --- a/docs/user_guide/eye_tracking_context/advanced_topics/scripting.md +++ b/docs/user_guide/eye_tracking_context/advanced_topics/scripting.md @@ -68,12 +68,12 @@ from argaze import ArFeatures # Check context type - # Live processing case: calibration method is available - if issubclass(type(context), ArFeatures.LiveProcessingContext): + # Data capture case: calibration method is available + if issubclass(type(context), ArFeatures.DataCaptureContext): ... - # Post processing case: more playback methods are available - if issubclass(type(context), ArFeatures.PostProcessingContext): + # Data playback case: playback methods are available + if issubclass(type(context), ArFeatures.DataPlaybackContext): ... # Check pipeline type diff --git a/docs/user_guide/eye_tracking_context/advanced_topics/timestamped_gaze_positions_edition.md b/docs/user_guide/eye_tracking_context/advanced_topics/timestamped_gaze_positions_edition.md index 340dbaf..959d955 100644 --- a/docs/user_guide/eye_tracking_context/advanced_topics/timestamped_gaze_positions_edition.md +++ b/docs/user_guide/eye_tracking_context/advanced_topics/timestamped_gaze_positions_edition.md @@ -28,8 +28,8 @@ for timestamped_gaze_position in ts_gaze_positions: ## Edit timestamped gaze positions from live stream -Real-time gaze positions can be edited thanks to the [GazePosition](../../../argaze.md/#argaze.GazeFeatures.GazePosition) class. -Besides, timestamps can be edited from the incoming data stream or, if not available, they can be edited thanks to the Python [time package](https://docs.python.org/3/library/time.html). +Real-time gaze positions can be edited using directly the [GazePosition](../../../argaze.md/#argaze.GazeFeatures.GazePosition) class. +Besides, timestamps can be edited from the incoming data stream or, if not available, they can be edited using the Python [time package](https://docs.python.org/3/library/time.html). ```python from argaze import GazeFeatures diff --git a/docs/user_guide/eye_tracking_context/configuration_and_execution.md b/docs/user_guide/eye_tracking_context/configuration_and_execution.md index f13c6a2..3deeb57 100644 --- a/docs/user_guide/eye_tracking_context/configuration_and_execution.md +++ b/docs/user_guide/eye_tracking_context/configuration_and_execution.md @@ -3,9 +3,12 @@ Edit and execute context The [utils.contexts module](../../argaze.md/#argaze.utils.contexts) provides ready-made contexts like: -* [Tobii Pro Glasses 2](context_modules/tobii_pro_glasses_2.md) live stream and post processing contexts, -* [Pupil Labs](context_modules/pupil_labs.md) live stream context, -* [OpenCV](context_modules/opencv.md) window cursor position and movie processing, +* [Tobii Pro Glasses 2](context_modules/tobii_pro_glasses_2.md) data capture and data playback contexts, +* [Tobii Pro Glasses 3](context_modules/tobii_pro_glasses_3.md) data capture context, +* [Pupil Labs Invisible](context_modules/pupil_labs_invisible.md) data capture context, +* [Pupil Labs Neon](context_modules/pupil_labs_neon.md) data capture context, +* [File](context_modules/file.md) data playback contexts, +* [OpenCV](context_modules/opencv.md) window cursor position capture and movie playback, * [Random](context_modules/random.md) gaze position generator. ## Edit JSON configuration diff --git a/docs/user_guide/eye_tracking_context/context_modules/file.md b/docs/user_guide/eye_tracking_context/context_modules/file.md new file mode 100644 index 0000000..5b5c8e9 --- /dev/null +++ b/docs/user_guide/eye_tracking_context/context_modules/file.md @@ -0,0 +1,75 @@ +File +====== + +ArGaze provides a ready-made contexts to read data from various file format. + +To select a desired context, the JSON samples have to be edited and saved inside an [ArContext configuration](../configuration_and_execution.md) file. +Notice that the *pipeline* entry is mandatory. + +```json +{ + JSON sample + "pipeline": ... +} +``` + +Read more about [ArContext base class in code reference](../../../argaze.md/#argaze.ArFeatures.ArContext). + +## CSV + +::: argaze.utils.contexts.File.CSV + +### JSON sample: splitted case + +To use when gaze position coordinates are splitted in two separated columns. + +```json +{ + "argaze.utils.contexts.File.CSV": { + "name": "CSV file data playback", + "path": "./src/argaze/utils/demo/gaze_positions_splitted.csv", + "timestamp_column": "Timestamp (ms)", + "x_column": "Gaze Position X (px)", + "y_column": "Gaze Position Y (px)", + "pipeline": ... + } +} +``` + +### JSON sample: joined case + +To use when gaze position coordinates are joined as a list in one single column. + +```json +{ + "argaze.utils.contexts.File.CSV" : { + "name": "CSV file data playback", + "path": "./src/argaze/utils/demo/gaze_positions_xy_joined.csv", + "timestamp_column": "Timestamp (ms)", + "xy_column": "Gaze Position (px)", + "pipeline": ... + } +} +``` + +### JSON sample: left and right eyes + +To use when gaze position coordinates and validity are given for each eye in six separated columns. + +```json +{ + "argaze.utils.contexts.File.CSV": { + "name": "CSV file data playback", + "path": "./src/argaze/utils/demo/gaze_positions_left_right_eyes.csv", + "timestamp_column": "Timestamp (ms)", + "left_eye_x_column": "Left eye X", + "left_eye_y_column": "Left eye Y", + "left_eye_validity_column": "Left eye validity", + "right_eye_x_column": "Right eye X", + "right_eye_y_column": "Right eye Y", + "right_eye_validity_column": "Right eye validity", + "rescale_to_pipeline_size": true, + "pipeline": ... + } +} +``` diff --git a/docs/user_guide/eye_tracking_context/context_modules/opencv.md b/docs/user_guide/eye_tracking_context/context_modules/opencv.md index 7244cd4..7d73a03 100644 --- a/docs/user_guide/eye_tracking_context/context_modules/opencv.md +++ b/docs/user_guide/eye_tracking_context/context_modules/opencv.md @@ -39,9 +39,25 @@ Read more about [ArContext base class in code reference](../../../argaze.md/#arg ```json { "argaze.utils.contexts.OpenCV.Movie": { - "name": "Open CV cursor", + "name": "Open CV movie", "path": "./src/argaze/utils/demo/tobii_record/segments/1/fullstream.mp4", "pipeline": ... } } ``` + +## Camera + +::: argaze.utils.contexts.OpenCV.Camera + +### JSON sample + +```json +{ + "argaze.utils.contexts.OpenCV.Camera": { + "name": "Open CV camera", + "identifier": 0, + "pipeline": ... + } +} +```
\ No newline at end of file diff --git a/docs/user_guide/eye_tracking_context/context_modules/pupil_labs_invisible.md b/docs/user_guide/eye_tracking_context/context_modules/pupil_labs_invisible.md new file mode 100644 index 0000000..1f4a94f --- /dev/null +++ b/docs/user_guide/eye_tracking_context/context_modules/pupil_labs_invisible.md @@ -0,0 +1,32 @@ +Pupil Labs Invisible +========== + +ArGaze provides a ready-made context to work with Pupil Labs Invisible device. + +To select a desired context, the JSON samples have to be edited and saved inside an [ArContext configuration](../configuration_and_execution.md) file. +Notice that the *pipeline* entry is mandatory. + +```json +{ + JSON sample + "pipeline": ... +} +``` + +Read more about [ArContext base class in code reference](../../../argaze.md/#argaze.ArFeatures.ArContext). + +## Live Stream + +::: argaze.utils.contexts.PupilLabsInvisible.LiveStream + +### JSON sample + +```json +{ + "argaze.utils.contexts.PupilLabsInvisible.LiveStream": { + "name": "Pupil Labs Invisible live stream", + "project": "my_experiment", + "pipeline": ... + } +} +``` diff --git a/docs/user_guide/eye_tracking_context/context_modules/pupil_labs.md b/docs/user_guide/eye_tracking_context/context_modules/pupil_labs_neon.md index d2ec336..535f5d5 100644 --- a/docs/user_guide/eye_tracking_context/context_modules/pupil_labs.md +++ b/docs/user_guide/eye_tracking_context/context_modules/pupil_labs_neon.md @@ -1,7 +1,7 @@ -Pupil Labs +Pupil Labs Neon ========== -ArGaze provides a ready-made context to work with Pupil Labs devices. +ArGaze provides a ready-made context to work with Pupil Labs Neon device. To select a desired context, the JSON samples have to be edited and saved inside an [ArContext configuration](../configuration_and_execution.md) file. Notice that the *pipeline* entry is mandatory. @@ -17,14 +17,14 @@ Read more about [ArContext base class in code reference](../../../argaze.md/#arg ## Live Stream -::: argaze.utils.contexts.PupilLabs.LiveStream +::: argaze.utils.contexts.PupilLabsNeon.LiveStream ### JSON sample ```json { - "argaze.utils.contexts.PupilLabs.LiveStream": { - "name": "Pupil Labs live stream", + "argaze.utils.contexts.PupilLabsNeon.LiveStream": { + "name": "Pupil Labs Neon live stream", "project": "my_experiment", "pipeline": ... } diff --git a/docs/user_guide/eye_tracking_context/context_modules/tobii_pro_glasses_2.md b/docs/user_guide/eye_tracking_context/context_modules/tobii_pro_glasses_2.md index fba6931..6ff44bd 100644 --- a/docs/user_guide/eye_tracking_context/context_modules/tobii_pro_glasses_2.md +++ b/docs/user_guide/eye_tracking_context/context_modules/tobii_pro_glasses_2.md @@ -42,16 +42,16 @@ Read more about [ArContext base class in code reference](../../../argaze.md/#arg } ``` -## Post Processing +## Segment Playback -::: argaze.utils.contexts.TobiiProGlasses2.PostProcessing +::: argaze.utils.contexts.TobiiProGlasses2.SegmentPlayback ### JSON sample ```json { - "argaze.utils.contexts.TobiiProGlasses2.PostProcessing" : { - "name": "Tobii Pro Glasses 2 post-processing", + "argaze.utils.contexts.TobiiProGlasses2.SegmentPlayback" : { + "name": "Tobii Pro Glasses 2 segment playback", "segment": "./src/argaze/utils/demo/tobii_record/segments/1", "pipeline": ... } diff --git a/docs/user_guide/eye_tracking_context/context_modules/tobii_pro_glasses_3.md b/docs/user_guide/eye_tracking_context/context_modules/tobii_pro_glasses_3.md new file mode 100644 index 0000000..3d37fcc --- /dev/null +++ b/docs/user_guide/eye_tracking_context/context_modules/tobii_pro_glasses_3.md @@ -0,0 +1,32 @@ +Tobii Pro Glasses 3 +=================== + +ArGaze provides a ready-made context to work with Tobii Pro Glasses 3 devices. + +To select a desired context, the JSON samples have to be edited and saved inside an [ArContext configuration](../configuration_and_execution.md) file. +Notice that the *pipeline* entry is mandatory. + +```json +{ + JSON sample + "pipeline": ... +} +``` + +Read more about [ArContext base class in code reference](../../../argaze.md/#argaze.ArFeatures.ArContext). + +## Live Stream + +::: argaze.utils.contexts.TobiiProGlasses3.LiveStream + +### JSON sample + +```json +{ + "argaze.utils.contexts.TobiiProGlasses3.LiveStream": { + "name": "Tobii Pro Glasses 3 live stream", + "pipeline": ... + } +} +``` + diff --git a/docs/user_guide/gaze_analysis_pipeline/advanced_topics/gaze_position_calibration.md b/docs/user_guide/gaze_analysis_pipeline/advanced_topics/gaze_position_calibration.md index 4970dba..effee18 100644 --- a/docs/user_guide/gaze_analysis_pipeline/advanced_topics/gaze_position_calibration.md +++ b/docs/user_guide/gaze_analysis_pipeline/advanced_topics/gaze_position_calibration.md @@ -7,7 +7,7 @@ The calibration algorithm can be selected by instantiating a particular [GazePos ## Enable ArFrame calibration -Gaze position calibration can be enabled thanks to a dedicated JSON entry. +Gaze position calibration can be enabled with a dedicated JSON entry. Here is an extract from the JSON ArFrame configuration file where a [Linear Regression](../../../argaze.md/#argaze.GazeAnalysis.LinearRegression) calibration algorithm is selected with no parameters: diff --git a/docs/user_guide/gaze_analysis_pipeline/advanced_topics/scripting.md b/docs/user_guide/gaze_analysis_pipeline/advanced_topics/scripting.md index 264e866..843274a 100644 --- a/docs/user_guide/gaze_analysis_pipeline/advanced_topics/scripting.md +++ b/docs/user_guide/gaze_analysis_pipeline/advanced_topics/scripting.md @@ -158,7 +158,7 @@ Last [GazeMovement](../../../argaze.md/#argaze.GazeFeatures.GazeMovement) identi This could also be the current gaze movement if [ArFrame.filter_in_progress_identification](../../../argaze.md/#argaze.ArFeatures.ArFrame) attribute is false. In that case, the last gaze movement *finished* flag is false. -Then, the last gaze movement type can be tested thanks to [GazeFeatures.is_fixation](../../../argaze.md/#argaze.GazeFeatures.is_fixation) and [GazeFeatures.is_saccade](../../../argaze.md/#argaze.GazeFeatures.is_saccade) functions. +Then, the last gaze movement type can be tested with [GazeFeatures.is_fixation](../../../argaze.md/#argaze.GazeFeatures.is_fixation) and [GazeFeatures.is_saccade](../../../argaze.md/#argaze.GazeFeatures.is_saccade) functions. ### *ar_frame.is_analysis_available()* @@ -182,7 +182,7 @@ This an iterator to access to all aoi scan path analysis. Notice that each aoi s ## Setup ArFrame image parameters -[ArFrame.image](../../../argaze.md/#argaze.ArFeatures.ArFrame.image) method parameters can be configured thanks to a Python dictionary. +[ArFrame.image](../../../argaze.md/#argaze.ArFeatures.ArFrame.image) method parameters can be configured with a Python dictionary. ```python # Assuming ArFrame is loaded diff --git a/docs/user_guide/gaze_analysis_pipeline/aoi_analysis.md b/docs/user_guide/gaze_analysis_pipeline/aoi_analysis.md index 2b64091..c2a6ac3 100644 --- a/docs/user_guide/gaze_analysis_pipeline/aoi_analysis.md +++ b/docs/user_guide/gaze_analysis_pipeline/aoi_analysis.md @@ -100,6 +100,11 @@ The second [ArLayer](../../argaze.md/#argaze.ArFeatures.ArLayer) pipeline step a Once gaze movements are matched to AOI, they are automatically appended to the AOIScanPath if required. +!!! warning "GazeFeatures.OutsideAOI" + When a fixation is not looking at any AOI, a step associated with an AOI called [GazeFeatures.OutsideAOI](../../argaze.md/#argaze.GazeFeatures.OutsideAOI) is added. As long as fixations are not looking at any AOI, all fixations/saccades are stored in this step. In this way, further analysis are calculated considering those extra [GazeFeatures.OutsideAOI](../../argaze.md/#argaze.GazeFeatures.OutsideAOI) steps. + + This is particularly important when calculating transition matrices, because otherwise we could have arcs between two AOIs when in fact the gaze could have fixed itself outside in the meantime. + The [AOIScanPath.duration_max](../../argaze.md/#argaze.GazeFeatures.AOIScanPath.duration_max) attribute is the duration from which older AOI scan steps are removed each time new AOI scan steps are added. !!! note "Optional" diff --git a/docs/user_guide/gaze_analysis_pipeline/background.md b/docs/user_guide/gaze_analysis_pipeline/background.md index 900d151..11285e3 100644 --- a/docs/user_guide/gaze_analysis_pipeline/background.md +++ b/docs/user_guide/gaze_analysis_pipeline/background.md @@ -7,7 +7,7 @@ Background is an optional [ArFrame](../../argaze.md/#argaze.ArFeatures.ArFrame) ## Load and display ArFrame background -[ArFrame.background](../../argaze.md/#argaze.ArFeatures.ArFrame.background) can be enabled thanks to a dedicated JSON entry. +[ArFrame.background](../../argaze.md/#argaze.ArFeatures.ArFrame.background) can be enabled with a dedicated JSON entry. Here is an extract from the JSON ArFrame configuration file where a background picture is loaded and displayed: @@ -28,7 +28,7 @@ Here is an extract from the JSON ArFrame configuration file where a background p ``` !!! note - As explained in [visualization chapter](visualization.md), the resulting image is accessible thanks to [ArFrame.image](../../argaze.md/#argaze.ArFeatures.ArFrame.image) method. + As explained in [visualization chapter](visualization.md), the resulting image is accessible with [ArFrame.image](../../argaze.md/#argaze.ArFeatures.ArFrame.image) method. Now, let's understand the meaning of each JSON entry. diff --git a/docs/user_guide/gaze_analysis_pipeline/heatmap.md b/docs/user_guide/gaze_analysis_pipeline/heatmap.md index 2057dbe..77b2be0 100644 --- a/docs/user_guide/gaze_analysis_pipeline/heatmap.md +++ b/docs/user_guide/gaze_analysis_pipeline/heatmap.md @@ -7,7 +7,7 @@ Heatmap is an optional [ArFrame](../../argaze.md/#argaze.ArFeatures.ArFrame) pip ## Enable and display ArFrame heatmap -[ArFrame.heatmap](../../argaze.md/#argaze.ArFeatures.ArFrame.heatmap) can be enabled thanks to a dedicated JSON entry. +[ArFrame.heatmap](../../argaze.md/#argaze.ArFeatures.ArFrame.heatmap) can be enabled with a dedicated JSON entry. Here is an extract from the JSON ArFrame configuration file where heatmap is enabled and displayed: @@ -31,7 +31,7 @@ Here is an extract from the JSON ArFrame configuration file where heatmap is ena } ``` !!! note - [ArFrame.heatmap](../../argaze.md/#argaze.ArFeatures.ArFrame.heatmap) is automatically updated each time the [ArFrame.look](../../argaze.md/#argaze.ArFeatures.ArFrame.look) method is called. As explained in [visualization chapter](visualization.md), the resulting image is accessible thanks to [ArFrame.image](../../argaze.md/#argaze.ArFeatures.ArFrame.image) method. + [ArFrame.heatmap](../../argaze.md/#argaze.ArFeatures.ArFrame.heatmap) is automatically updated each time the [ArFrame.look](../../argaze.md/#argaze.ArFeatures.ArFrame.look) method is called. As explained in [visualization chapter](visualization.md), the resulting image is accessible with [ArFrame.image](../../argaze.md/#argaze.ArFeatures.ArFrame.image) method. Now, let's understand the meaning of each JSON entry. diff --git a/docs/user_guide/gaze_analysis_pipeline/visualization.md b/docs/user_guide/gaze_analysis_pipeline/visualization.md index 32395c3..08b5465 100644 --- a/docs/user_guide/gaze_analysis_pipeline/visualization.md +++ b/docs/user_guide/gaze_analysis_pipeline/visualization.md @@ -7,7 +7,7 @@ Visualization is not a pipeline step, but each [ArFrame](../../argaze.md/#argaze ## Add image parameters to ArFrame JSON configuration -[ArFrame.image](../../argaze.md/#argaze.ArFeatures.ArFrame.image) method parameters can be configured thanks to a dedicated JSON entry. +[ArFrame.image](../../argaze.md/#argaze.ArFeatures.ArFrame.image) method parameters can be configured with a dedicated JSON entry. Here is an extract from the JSON ArFrame configuration file with a sample where image parameters are added: diff --git a/docs/user_guide/utils/demonstrations_scripts.md b/docs/user_guide/utils/demonstrations_scripts.md index dd1b8e0..c7560eb 100644 --- a/docs/user_guide/utils/demonstrations_scripts.md +++ b/docs/user_guide/utils/demonstrations_scripts.md @@ -9,30 +9,70 @@ Collection of command-line scripts for demonstration purpose. !!! note *Use -h option to get command arguments documentation.* +!!! note + Each demonstration outputs metrics into *_export/records* folder. + ## Random context -Load **random_context.json** file to process random gaze positions: +Load **random_context.json** file to generate random gaze positions: ```shell python -m argaze load ./src/argaze/utils/demo/random_context.json ``` -## OpenCV cursor context +## CSV file context + +Load **csv_file_context_xy_joined.json** file to analyze gaze positions from a CSV file where gaze position coordinates are joined as a list in one single column: + +```shell +python -m argaze load ./src/argaze/utils/demo/csv_file_context_xy_joined.json +``` + +Load **csv_file_context_xy_splitted.json** file to analyze gaze positions from a CSV file where gaze position coordinates are splitted in two seperated column: + +```shell +python -m argaze load ./src/argaze/utils/demo/csv_file_context_xy_splitted.json +``` + +Load **csv_file_context_left_right_eyes.json** file to analyze gaze positions from a CSV file where gaze position coordinates and validity are given for each eye in six separated columns.: + +```shell +python -m argaze load ./src/argaze/utils/demo/csv_file_context_left_right_eyes.json +``` + +!!! note + The left/right eyes context allows to parse Tobii Spectrum data for example. + +## OpenCV -Load **opencv_cursor_context.json** file to process cursor pointer positions over OpenCV window: +### Cursor context + +Load **opencv_cursor_context.json** file to capture cursor pointer positions over OpenCV window: ```shell python -m argaze load ./src/argaze/utils/demo/opencv_cursor_context.json ``` -## OpenCV movie context +### Movie context -Load **opencv_movie_context.json** file to process movie pictures and also cursor pointer positions over OpenCV window: +Load **opencv_movie_context.json** file to playback a movie and also capture cursor pointer positions over OpenCV window: ```shell python -m argaze load ./src/argaze/utils/demo/opencv_movie_context.json ``` +### Camera context + +Edit **aruco_markers_pipeline.json** file as to adapt the *size* to the camera resolution and to set a consistent *sides_mask* value. + +Edit **opencv_camera_context.json** file as to select camera device identifier (default is 0). + +Then, load **opencv_camera_context.json** file to capture camera pictures and also capture cursor pointer positions over OpenCV window: + +```shell +python -m argaze load ./src/argaze/utils/demo/opencv_camera_context.json +``` + ## Tobii Pro Glasses 2 ### Live stream context @@ -40,7 +80,9 @@ python -m argaze load ./src/argaze/utils/demo/opencv_movie_context.json !!! note This demonstration requires to print **A3_demo.pdf** file located in *./src/argaze/utils/demo/* folder on A3 paper sheet. -Edit **tobii_live_stream_context.json** file as to select exisiting IP *address*, *project* or *participant* names and setup Tobii *configuration* parameters: +Edit **aruco_markers_pipeline.json** file as to adapt the *size* to the camera resolution ([1920, 1080]) and to set *sides_mask* value to 420. + +Edit **tobii_g2_live_stream_context.json** file as to select exisiting IP *address*, *project* or *participant* names and setup Tobii *configuration* parameters: ```json { @@ -63,35 +105,50 @@ Edit **tobii_live_stream_context.json** file as to select exisiting IP *address* } ``` -Then, load **tobii_live_stream_context.json** file to find ArUco marker into camera image and, project gaze positions into AOI: +Then, load **tobii_g2_live_stream_context.json** file to find ArUco marker into camera image and, project gaze positions into AOI: ```shell -python -m argaze load ./src/argaze/utils/demo/tobii_live_stream_context.json +python -m argaze load ./src/argaze/utils/demo/tobii_g2_live_stream_context.json ``` -### Post-processing context +### Segment playback context -!!! note - This demonstration requires to print **A3_demo.pdf** file located in *./src/argaze/utils/demo/* folder on A3 paper sheet. +Edit **aruco_markers_pipeline.json** file as to adapt the *size* to the camera resolution ([1920, 1080]) and to set *sides_mask* value to 420. -Edit **tobii_post_processing_context.json** file to select an existing Tobii *segment* folder: +Edit **tobii_g2_segment_playback_context.json** file to select an existing Tobii *segment* folder: ```json { - "argaze.utils.contexts.TobiiProGlasses2.PostProcessing" : { - "name": "Tobii Pro Glasses 2 post-processing", + "argaze.utils.contexts.TobiiProGlasses2.SegmentPlayback" : { + "name": "Tobii Pro Glasses 2 segment playback", "segment": "record/segments/1", "pipeline": "aruco_markers_pipeline.json" } } ``` -Then, load **tobii_post_processing_context.json** file to find ArUco marker into camera image and, project gaze positions into AOI: +Then, load **tobii_g2_segment_playback_context.json** file to find ArUco marker into camera image and, project gaze positions into AOI: + +```shell +python -m argaze load ./src/argaze/utils/demo/tobii_g2_segment_playback_context.json +``` + +## Tobii Pro Glasses 3 + +### Live stream context + +!!! note + This demonstration requires to print **A3_demo.pdf** file located in *./src/argaze/utils/demo/* folder on A3 paper sheet. + +Edit **aruco_markers_pipeline.json** file as to adapt the *size* to the camera resolution ([1920, 1080]) and to set *sides_mask* value to 420. + +Load **tobii_g3_live_stream_context.json** file to find ArUco marker into camera image and, project gaze positions into AOI: ```shell -python -m argaze load ./src/argaze/utils/demo/tobii_post_processing_context.json +python -m argaze load ./src/argaze/utils/demo/tobii_g3_live_stream_context.json ``` + ## Pupil Invisible ### Live stream context @@ -99,8 +156,25 @@ python -m argaze load ./src/argaze/utils/demo/tobii_post_processing_context.json !!! note This demonstration requires to print **A3_demo.pdf** file located in *./src/argaze/utils/demo/* folder on A3 paper sheet. -Load **pupillabs_live_stream_context.json** file to find ArUco marker into camera image and, project gaze positions into AOI: +Edit **aruco_markers_pipeline.json** file as to adapt the *size* to the camera resolution ([1088, 1080]) and to set *sides_mask* value to 4. + +Load **pupillabs_invisible_live_stream_context.json** file to find ArUco marker into camera image and, project gaze positions into AOI: + +```shell +python -m argaze load ./src/argaze/utils/demo/pupillabs_invisible_live_stream_context.json +``` + +## Pupil Neon + +### Live stream context + +!!! note + This demonstration requires to print **A3_demo.pdf** file located in *./src/argaze/utils/demo/* folder on A3 paper sheet. + +Edit **aruco_markers_pipeline.json** file as to adapt the *size* to the camera resolution ([1600, 1200]) and to set *sides_mask* value to 200. + +Load **pupillabs_neon_live_stream_context.json** file to find ArUco marker into camera image and, project gaze positions into AOI: ```shell -python -m argaze load ./src/argaze/utils/demo/pupillabs_live_stream_context.json +python -m argaze load ./src/argaze/utils/demo/pupillabs_neon_live_stream_context.json ``` diff --git a/docs/user_guide/utils/estimate_aruco_markers_pose.md b/docs/user_guide/utils/estimate_aruco_markers_pose.md index 3d34972..55bd232 100644 --- a/docs/user_guide/utils/estimate_aruco_markers_pose.md +++ b/docs/user_guide/utils/estimate_aruco_markers_pose.md @@ -15,7 +15,7 @@ Firstly, edit **utils/estimate_markers_pose/context.json** file as to select a m } ``` -Sencondly, edit **utils/estimate_markers_pose/pipeline.json** file to setup ArUco camera *size*, ArUco detector *dictionary*, *pose_size* and *pose_ids* attributes. +Secondly, edit **utils/estimate_markers_pose/pipeline.json** file to setup ArUco camera *size*, ArUco detector *dictionary*, *pose_size* and *pose_ids* attributes. ```json { @@ -27,7 +27,7 @@ Sencondly, edit **utils/estimate_markers_pose/pipeline.json** file to setup ArUc "pose_size": 4, "pose_ids": [], "parameters": { - "useAruco3Detection": 1 + "useAruco3Detection": true }, "observers":{ "observers.ArUcoMarkersPoseRecorder": { diff --git a/docs/user_guide/utils/main_commands.md b/docs/user_guide/utils/main_commands.md index 4dd3434..9227d8d 100644 --- a/docs/user_guide/utils/main_commands.md +++ b/docs/user_guide/utils/main_commands.md @@ -35,13 +35,13 @@ For example: echo "print(context)" > /tmp/argaze ``` -* Pause context processing: +* Pause context: ```shell echo "context.pause()" > /tmp/argaze ``` -* Resume context processing: +* Resume context: ```shell echo "context.resume()" > /tmp/argaze @@ -54,3 +54,6 @@ Modify the content of JSON CONFIGURATION file with another JSON CHANGES file the ```shell python -m argaze edit CONFIGURATION CHANGES OUTPUT ``` + +!!! note + Use *null* value to remove an entry. @@ -9,7 +9,10 @@ nav: - user_guide/eye_tracking_context/configuration_and_execution.md - Context Modules: - user_guide/eye_tracking_context/context_modules/tobii_pro_glasses_2.md - - user_guide/eye_tracking_context/context_modules/pupil_labs.md + - user_guide/eye_tracking_context/context_modules/tobii_pro_glasses_3.md + - user_guide/eye_tracking_context/context_modules/pupil_labs_invisible.md + - user_guide/eye_tracking_context/context_modules/pupil_labs_neon.md + - user_guide/eye_tracking_context/context_modules/file.md - user_guide/eye_tracking_context/context_modules/opencv.md - user_guide/eye_tracking_context/context_modules/random.md - Advanced Topics: @@ -52,14 +55,25 @@ nav: - user_guide/utils/demonstrations_scripts.md - user_guide/utils/estimate_aruco_markers_pose.md - Use Cases: - - Pilot gaze monitoring: - - use_cases/pilot_gaze_monitoring/introduction.md - - use_cases/pilot_gaze_monitoring/context.md - - use_cases/pilot_gaze_monitoring/pipeline.md - - use_cases/pilot_gaze_monitoring/observers.md + - Pilot gaze tracking: + - use_cases/pilot_gaze_tracking/introduction.md + - use_cases/pilot_gaze_tracking/context.md + - use_cases/pilot_gaze_tracking/pipeline.md + - use_cases/pilot_gaze_tracking/observers.md + - Air traffic controller gaze study: + - use_cases/air_controller_gaze_study/introduction.md + - use_cases/air_controller_gaze_study/context.md + - use_cases/air_controller_gaze_study/pipeline.md + - use_cases/air_controller_gaze_study/observers.md + #- Gaze-based candidate selection: + # - use_cases/gaze_based_candidate_selection/introduction.md + # - use_cases/gaze_based_candidate_selection/context.md + # - use_cases/gaze_based_candidate_selection/pipeline.md + # - use_cases/gaze_based_candidate_selection/observers.md - Code Reference: - argaze.md - Contributor Guide: + - contributor_guide/build_package.md - contributor_guide/build_documentation.md - contributor_guide/unitary_test.md theme: diff --git a/pyproject.toml b/pyproject.toml index 383e156..3904a2f 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,12 +1,12 @@ [build-system] requires = [ - "setuptools" + "setuptools", + "setuptools-scm" ] build-backend = "setuptools.build_meta" [project] name = "argaze" -version = "0.0.7" authors = [ {"name" = "ACHIL laboratory at Ecole Nationale de l'Aviation Civile (ENAC)", "email" = "argaze-contact@recherche.enac.fr"} ] @@ -21,7 +21,7 @@ keywords=[ ] license = {file = "LICENSE"} classifiers=[ - "Development Status :: 3 - Alpha", + "Development Status :: 5 - Production/Stable", "Intended Audience :: Developers", "Intended Audience :: Science/Research", "Topic :: Scientific/Engineering :: Human Machine Interfaces", @@ -30,8 +30,8 @@ classifiers=[ "Operating System :: OS Independent" ] dependencies = [ - "opencv-python>=4.7.0", - "opencv-contrib-python>=4.7.0", + "opencv-python>=4.10.0", + "opencv-contrib-python>=4.10.0", "numpy", "pandas", "av", @@ -42,6 +42,7 @@ dependencies = [ "scipy", "scikit-learn" ] +dynamic = ["version"] [project.urls] Homepage = "https://gitpub.recherche.enac.fr/argaze" @@ -51,3 +52,5 @@ Issues = "https://git.recherche.enac.fr/projects/argaze/issues" [tool.setuptools] package-dir = {"" = "src"} + +[tool.setuptools_scm] diff --git a/src/argaze.test/ArUcoMarker/ArUcoCamera.py b/src/argaze.test/ArUcoMarker/ArUcoCamera.py index 76b567e..0777beb 100644 --- a/src/argaze.test/ArUcoMarker/ArUcoCamera.py +++ b/src/argaze.test/ArUcoMarker/ArUcoCamera.py @@ -71,10 +71,6 @@ class TestArUcoCameraClass(unittest.TestCase): self.assertEqual(len(ar_scene.layers.items()), 1) self.assertEqual(len(ar_scene.layers["Main"].aoi_scene), 1) self.assertEqual(ar_scene.layers["Main"].aoi_scene['Test'].points_number, 4) - - # Check ArScene - self.assertEqual(ar_scene.angle_tolerance, 1.0) - self.assertEqual(ar_scene.distance_tolerance, 2.0) if __name__ == '__main__': diff --git a/src/argaze.test/ArUcoMarker/utils/aruco_camera.json b/src/argaze.test/ArUcoMarker/utils/aruco_camera.json index 980dc9f..7217c0e 100644 --- a/src/argaze.test/ArUcoMarker/utils/aruco_camera.json +++ b/src/argaze.test/ArUcoMarker/utils/aruco_camera.json @@ -63,9 +63,7 @@ "Main" : { "aoi_scene": "aoi_3d.obj" } - }, - "angle_tolerance": 1.0, - "distance_tolerance": 2.0 + } }, "TestSceneB" : { "aruco_markers_group": { @@ -87,9 +85,7 @@ "Main" : { "aoi_scene": "aoi_3d.obj" } - }, - "angle_tolerance": 1.0, - "distance_tolerance": 2.0 + } } }, "layers": { diff --git a/src/argaze/ArFeatures.py b/src/argaze/ArFeatures.py index 8d9eceb..28084aa 100644 --- a/src/argaze/ArFeatures.py +++ b/src/argaze/ArFeatures.py @@ -344,7 +344,7 @@ class ArLayer(DataFeatures.SharedObject, DataFeatures.PipelineStepObject): if self.__aoi_matcher is not None and self.__aoi_scene is not None: - # Update looked aoi thanks to aoi matcher + # Update looked aoi with aoi matcher # Note: don't filter valid/invalid and finished/unfinished fixation/saccade as we don't know how the aoi matcher works internally self.__looked_aoi_name, _ = self.__aoi_matcher.match(gaze_movement, self.__aoi_scene) @@ -768,7 +768,7 @@ class ArFrame(DataFeatures.SharedObject, DataFeatures.PipelineStepObject): self.__identified_gaze_movement = self.__gaze_movement_identifier.current_gaze_movement() # Update heatmap - if self.__heatmap is not None: + if self.__heatmap is not None and self.__calibrated_gaze_position: # Scale gaze position value scale = numpy.array([self.__heatmap.size[0] / self.__size[0], self.__heatmap.size[1] / self.__size[1]]) @@ -915,8 +915,6 @@ class ArScene(DataFeatures.PipelineStepObject): # Init private attributes self._layers = {} self.__frames = {} - self.__angle_tolerance = 0. - self.__distance_tolerance = 0. @property def layers(self) -> dict: @@ -1010,35 +1008,13 @@ class ArScene(DataFeatures.PipelineStepObject): for name, frame in self.__frames.items(): frame.parent = self - @property - def angle_tolerance(self) -> float: - """Angle error tolerance to validate marker pose in degree used into [estimate_pose][argaze.ArFeatures.ArScene.estimate_pose] function.""" - return self.__angle_tolerance - - @angle_tolerance.setter - def angle_tolerance(self, value: float): - - self.__angle_tolerance = value - - @property - def distance_tolerance(self) -> float: - """Distance error tolerance to validate marker pose in centimeter used into [estimate_pose][argaze.ArFeatures.ArScene.estimate_pose] function.""" - return self.__distance_tolerance - - @distance_tolerance.setter - def distance_tolerance(self, value: float): - - self.__distance_tolerance = value - def as_dict(self) -> dict: """Export ArScene properties as dictionary.""" return { **DataFeatures.PipelineStepObject.as_dict(self), "layers": self._layers, - "frames": self.__frames, - "angle_tolerance": self.__angle_tolerance, - "distance_tolerance": self.__distance_tolerance + "frames": self.__frames } @DataFeatures.PipelineStepMethod @@ -1175,7 +1151,7 @@ class ArCamera(ArFrame): self.__projection_cache = projection_cache # The file doesn't exist yet: store projections into the cache - if not os.path.exists(os.path.join( DataFeatures.get_working_directory(), self.__projection_cache) ): + if not os.path.exists(self.__projection_cache): self.__projection_cache_writer = UtilsFeatures.FileWriter(path=self.__projection_cache) self.__projection_cache_reader = None @@ -1197,14 +1173,16 @@ class ArCamera(ArFrame): for layer_name, layer in self.layers.items(): - # Initialize layer if needed - if layer.aoi_scene is None: + with layer._lock: - layer.aoi_scene = AOI2DScene.AOI2DScene() + # Initialize layer if needed + if layer.aoi_scene is None: - else: + layer.aoi_scene = AOI2DScene.AOI2DScene() + + else: - layer.aoi_scene.clear() + layer.aoi_scene.clear() def _write_projection_cache(self, timestamp: int|float, exception = None): """Write layers aoi scene into the projection cache. @@ -1514,6 +1492,7 @@ class ArContext(DataFeatures.PipelineStepObject): # Init private attributes self.__pipeline = None self.__exceptions = DataFeatures.TimestampedExceptions() + self.__gaze_positions_buffer = GazeFeatures.TimeStampedGazePositions() # Init protected attributes self._stop_event = threading.Event() @@ -1521,7 +1500,7 @@ class ArContext(DataFeatures.PipelineStepObject): self._image_parameters = DEFAULT_ARCONTEXT_IMAGE_PARAMETERS @property - def pipeline(self) -> DataFeatures.PipelineStepObject: + def pipeline(self) -> ArFrame|ArCamera: """ArFrame used to process gaze data or ArCamera used to process gaze data and video of environment.""" return self.__pipeline @@ -1538,7 +1517,7 @@ class ArContext(DataFeatures.PipelineStepObject): return self.__exceptions def as_dict(self) -> dict: - """Export ArContext properties as dictionary.""" + """Export context properties as dictionary.""" return { **DataFeatures.PipelineStepObject.as_dict(self), @@ -1548,13 +1527,13 @@ class ArContext(DataFeatures.PipelineStepObject): @DataFeatures.PipelineStepEnter def __enter__(self): - """Enter into ArContext.""" + """Enter into context.""" return self @DataFeatures.PipelineStepExit def __exit__(self, exception_type, exception_value, exception_traceback): - """Exit from ArContext.""" + """Exit from context.""" pass def _process_gaze_position(self, timestamp: int | float, x: int | float = None, y: int | float = None, precision: int | float = None): @@ -1564,23 +1543,33 @@ class ArContext(DataFeatures.PipelineStepObject): if issubclass(type(self.__pipeline), ArFrame): - try: + # Edit gaze position + if x is None and y is None: - if x is None and y is None: + gaze_position = GazeFeatures.GazePosition(timestamp=timestamp) - # Edit empty gaze position - self.__pipeline.look(GazeFeatures.GazePosition(timestamp=timestamp)) + else: - else: + gaze_position = GazeFeatures.GazePosition((x, y), precision=precision, timestamp=timestamp) + + # Buffer gaze position + self.__gaze_positions_buffer.append(gaze_position) + + # Process all buffered gaze positions while the pipeline is available + while not self.__pipeline.busy() and self.__gaze_positions_buffer: + + gaze_position = self.__gaze_positions_buffer.pop(0) + + try: # Edit gaze position - self.__pipeline.look(GazeFeatures.GazePosition((x, y), precision=precision, timestamp=timestamp)) + self.__pipeline.look(gaze_position) - except DataFeatures.TimestampedException as e: + except DataFeatures.TimestampedException as e: - logging.warning('%s._process_gaze_position: %s', DataFeatures.get_class_path(self), e) + logging.warning('%s._process_gaze_position: %s', DataFeatures.get_class_path(self), e) - self.__exceptions.append(e) + self.__exceptions.append(e) else: @@ -1709,24 +1698,24 @@ class ArContext(DataFeatures.PipelineStepObject): @DataFeatures.PipelineStepMethod def pause(self): - """Pause pipeline processing.""" + """Pause context.""" self._pause_event.set() def is_paused(self) -> bool: - """Is pipeline processing paused?""" + """Is context paused?""" return self._pause_event.is_set() @DataFeatures.PipelineStepMethod def resume(self): - """Resume pipeline processing.""" + """Resume context.""" self._pause_event.clear() -class LiveProcessingContext(ArContext): +class DataCaptureContext(ArContext): """ - Defines abstract live data processing context. + Defines abstract data capture context. """ @DataFeatures.PipelineStepInit @@ -1739,14 +1728,14 @@ class LiveProcessingContext(ArContext): raise NotImplementedError -# Define default PostProcessingContext image parameters -DEFAULT_POST_PROCESSING_CONTEXT_IMAGE_PARAMETERS = { +# Define default DataPlaybackContext image parameters +DEFAULT_DATA_PLAYBACK_CONTEXT_IMAGE_PARAMETERS = { "draw_progression": True } -class PostProcessingContext(ArContext): +class DataPlaybackContext(ArContext): """ - Defines abstract post data processing context. + Defines abstract data playback context. """ @DataFeatures.PipelineStepInit @@ -1754,17 +1743,7 @@ class PostProcessingContext(ArContext): super().__init__() - self._image_parameters = {**DEFAULT_ARCONTEXT_IMAGE_PARAMETERS, **DEFAULT_POST_PROCESSING_CONTEXT_IMAGE_PARAMETERS} - - def previous(self): - """Go to previous frame""" - - raise NotImplementedError - - def next(self): - """Go to next frame""" - - raise NotImplementedError + self._image_parameters = {**DEFAULT_ARCONTEXT_IMAGE_PARAMETERS, **DEFAULT_DATA_PLAYBACK_CONTEXT_IMAGE_PARAMETERS} @property def duration(self) -> int|float: @@ -1774,19 +1753,19 @@ class PostProcessingContext(ArContext): @property def progression(self) -> float: - """Get data processing progression between 0 and 1.""" + """Get data playback progression between 0 and 1.""" raise NotImplementedError @DataFeatures.PipelineStepImage def image(self, draw_progression: bool = True, **kwargs): """ - Get pipeline image with post processing information. + Get pipeline image with data playback information. Parameters: draw_progression: draw progress bar """ - logging.debug('PostProcessingContext.image %s', self.name) + logging.debug('DataPlaybackContext.image %s', self.name) image = super().image(**kwargs) height, width, _ = image.shape diff --git a/src/argaze/ArUcoMarker/ArUcoCamera.py b/src/argaze/ArUcoMarker/ArUcoCamera.py index 8ae8cb8..4fa8b83 100644 --- a/src/argaze/ArUcoMarker/ArUcoCamera.py +++ b/src/argaze/ArUcoMarker/ArUcoCamera.py @@ -119,61 +119,63 @@ class ArUcoCamera(ArFeatures.ArCamera): logging.debug('ArUcoCamera.watch') - # Use camera frame lock feature - with self._lock: + # Draw black rectangles to mask sides + if self.__sides_mask > 0: + + logging.debug('\t> drawing sides mask (%i px)', self.__sides_mask) - # Draw black rectangles to mask sides - if self.__sides_mask > 0: - logging.debug('\t> drawing sides mask (%i px)', self.__sides_mask) + height, width, _ = image.shape - height, width, _ = image.shape + cv2.rectangle(image, (0, 0), (self.__sides_mask, height), (0, 0, 0), -1) + cv2.rectangle(image, (width - self.__sides_mask, 0), (width, height), (0, 0, 0), -1) - cv2.rectangle(image, (0, 0), (self.__sides_mask, height), (0, 0, 0), -1) - cv2.rectangle(image, (width - self.__sides_mask, 0), (width, height), (0, 0, 0), -1) + # Fill camera frame background with timestamped image + with self._lock: - # Fill camera frame background with timestamped image self.background = image - # Read projection from the cache if required - if not self._read_projection_cache(image.timestamp): + # Read projection from the cache if required + if not self._read_projection_cache(image.timestamp): - # Detect aruco markers - logging.debug('\t> detect markers') + # Detect aruco markers + logging.debug('\t> detect markers') - self.__aruco_detector.detect_markers(image) + self.__aruco_detector.detect_markers(image) - # Clear former layers projection into camera frame - self._clear_projection() + # Clear former layers projection into camera frame + self._clear_projection() - # Project each aoi 3d scene into camera frame - for scene_name, scene in self.scenes.items(): + # Project each aoi 3d scene into camera frame + for scene_name, scene in self.scenes.items(): - ''' TODO: Enable aruco_aoi processing - if scene.aruco_aoi: + ''' TODO: Enable aruco_aoi processing + if scene.aruco_aoi: - try: + try: - # Build AOI scene directly from detected ArUco marker corners - self.layers[??].aoi_2d_scene |= scene.build_aruco_aoi_scene(self.__aruco_detector.detected_markers()) + # Build AOI scene directly from detected ArUco marker corners + self.layers[??].aoi_2d_scene |= scene.build_aruco_aoi_scene(self.__aruco_detector.detected_markers()) - except ArFeatures.PoseEstimationFailed: + except ArFeatures.PoseEstimationFailed: - pass - ''' + pass + ''' - # Estimate scene pose from detected scene markers - logging.debug('\t> estimate %s scene pose', scene_name) + # Estimate scene pose from detected scene markers + logging.debug('\t> estimate %s scene pose', scene_name) - try: + try: + + tvec, rmat, _ = scene.estimate_pose(self.__aruco_detector.detected_markers(), timestamp=image.timestamp) - tvec, rmat, _ = scene.estimate_pose(self.__aruco_detector.detected_markers(), timestamp=image.timestamp) + # Project scene into camera frame according estimated pose + for layer_name, layer_projection in scene.project(tvec, rmat, self.visual_hfov, self.visual_vfov, timestamp=image.timestamp): - # Project scene into camera frame according estimated pose - for layer_name, layer_projection in scene.project(tvec, rmat, self.visual_hfov, self.visual_vfov, timestamp=image.timestamp): + logging.debug('\t> project %s scene %s layer', scene_name, layer_name) - logging.debug('\t> project %s scene %s layer', scene_name, layer_name) + try: - try: + with self.layers[layer_name]._lock: # Update camera layer aoi self.layers[layer_name].aoi_scene |= layer_projection @@ -181,23 +183,25 @@ class ArUcoCamera(ArFeatures.ArCamera): # Timestamp camera layer self.layers[layer_name].timestamp = image.timestamp - except KeyError: + except KeyError: + + pass - pass + # Write projection into the cache if required + self._write_projection_cache(image.timestamp) - # Write projection into the cache if required - self._write_projection_cache(image.timestamp) + except DataFeatures.TimestampedException as e: - except DataFeatures.TimestampedException as e: + # Write exception into the cache if required + self._write_projection_cache(image.timestamp, e) - # Write exception into the cache if required - self._write_projection_cache(image.timestamp, e) + # Raise exception + raise e - # Raise exception - raise e + # Copy camera frame background into scene frames background if required + if self.copy_background_into_scenes_frames: - # Copy camera frame background into scene frames background if required - if self.copy_background_into_scenes_frames: + with self._lock: self._copy_background_into_scenes_frames() diff --git a/src/argaze/ArUcoMarker/ArUcoDetector.py b/src/argaze/ArUcoMarker/ArUcoDetector.py index 50da144..8ff840b 100644 --- a/src/argaze/ArUcoMarker/ArUcoDetector.py +++ b/src/argaze/ArUcoMarker/ArUcoDetector.py @@ -21,110 +21,63 @@ import json from collections import Counter from typing import Self -import cv2 as cv +import cv2 import numpy -from cv2 import aruco from argaze import DataFeatures from argaze.ArUcoMarker import ArUcoMarkerDictionary, ArUcoMarker, ArUcoOpticCalibrator, ArUcoMarkerGroup -class DetectorParameters(): - """Wrapper class around ArUco marker detector parameters. +class DetectorParameters(cv2.aruco.DetectorParameters): + """OpenCV DetectorParameters wrapper. !!! note More details on [opencv page](https://docs.opencv.org/4.x/d1/dcd/structcv_1_1aruco_1_1DetectorParameters.html) """ - __parameters = aruco.DetectorParameters() - __parameters_names = [ - 'adaptiveThreshConstant', - 'adaptiveThreshWinSizeMax', - 'adaptiveThreshWinSizeMin', - 'adaptiveThreshWinSizeStep', - 'aprilTagCriticalRad', - 'aprilTagDeglitch', - 'aprilTagMaxLineFitMse', - 'aprilTagMaxNmaxima', - 'aprilTagMinClusterPixels', - 'aprilTagMinWhiteBlackDiff', - 'aprilTagQuadDecimate', - 'aprilTagQuadSigma', - 'cornerRefinementMaxIterations', - 'cornerRefinementMethod', - 'cornerRefinementMinAccuracy', - 'cornerRefinementWinSize', - 'markerBorderBits', - 'minMarkerPerimeterRate', - 'maxMarkerPerimeterRate', - 'minMarkerDistanceRate', - 'detectInvertedMarker', - 'errorCorrectionRate', - 'maxErroneousBitsInBorderRate', - 'minCornerDistanceRate', - 'minDistanceToBorder', - 'minOtsuStdDev', - 'perspectiveRemoveIgnoredMarginPerCell', - 'perspectiveRemovePixelPerCell', - 'polygonalApproxAccuracyRate', - 'useAruco3Detection' - ] - def __init__(self, **kwargs): - for parameter, value in kwargs.items(): - setattr(self.__parameters, parameter, value) - - self.__dict__.update(kwargs) - - def __setattr__(self, parameter, value): + super().__init__() - setattr(self.__parameters, parameter, value) + self.__modified = [] - def __getattr__(self, parameter): + self.__parameters_names = [name for name in dir(self) if not name.startswith('_')] + self.__parameters_names.remove('from_json') + self.__parameters_names.remove('readDetectorParameters') + self.__parameters_names.remove('writeDetectorParameters') + + for parameter, value in kwargs.items(): - return getattr(self.__parameters, parameter) + setattr(self, parameter, value) + self.__modified.append(parameter) @classmethod def from_json(cls, json_filepath) -> Self: """Load detector parameters from .json file.""" with open(json_filepath) as configuration_file: + return DetectorParameters(**json.load(configuration_file)) def __str__(self) -> str: """Detector parameters string representation.""" - return f'{self}' - - def __format__(self, spec: str) -> str: - """Formated detector parameters string representation. - - Parameters: - spec: 'modified' to get only modified parameters. - """ - output = '' for parameter in self.__parameters_names: - if parameter in self.__dict__.keys(): + if parameter in self.__modified: - output += f'\t*{parameter}: {getattr(self.__parameters, parameter)}\n' + output += f'\t*{parameter}: {getattr(self, parameter)}\n' - elif spec == "": + else: - output += f'\t{parameter}: {getattr(self.__parameters, parameter)}\n' + output += f'\t{parameter}: {getattr(self, parameter)}\n' return output - @property - def internal(self): - return self.__parameters - - class ArUcoDetector(DataFeatures.PipelineStepObject): - """OpenCV ArUco library wrapper.""" + """OpenCV ArucoDetector wrapper.""" # noinspection PyMissingConstructor @DataFeatures.PipelineStepInit @@ -201,7 +154,7 @@ class ArUcoDetector(DataFeatures.PipelineStepObject): self.__detected_markers, detected_markers_corners, detected_markers_ids = {}, [], [] # Detect markers into gray picture - detected_markers_corners, detected_markers_ids, _ = aruco.detectMarkers(cv.cvtColor(image, cv.COLOR_BGR2GRAY), self.__dictionary.markers, parameters=self.__parameters.internal if self.__parameters else None) + detected_markers_corners, detected_markers_ids, _ = cv2.aruco.detectMarkers(cv2.cvtColor(image, cv2.COLOR_BGR2GRAY), self.__dictionary.markers, parameters=self.__parameters) # Is there detected markers ? if len(detected_markers_corners) > 0: @@ -272,7 +225,7 @@ class ArUcoDetector(DataFeatures.PipelineStepObject): if len(ids) == 0: ids = self.__detected_markers.keys() - # Prepare data for aruco.estimatePoseSingleMarkers function + # Prepare data for cv2.aruco.estimatePoseSingleMarkers function selected_markers_corners = tuple() selected_markers_ids = [] @@ -286,14 +239,14 @@ class ArUcoDetector(DataFeatures.PipelineStepObject): # Estimate pose of selected markers if len(selected_markers_corners) > 0: - markers_rvecs, markers_tvecs, markers_points = aruco.estimatePoseSingleMarkers(selected_markers_corners, size, numpy.array(self.__optic_parameters.K), numpy.array(self.__optic_parameters.D)) + markers_rvecs, markers_tvecs, markers_points = cv2.aruco.estimatePoseSingleMarkers(selected_markers_corners, size, numpy.array(self.__optic_parameters.K), numpy.array(self.__optic_parameters.D)) for i, marker_id in enumerate(selected_markers_ids): marker = self.__detected_markers[marker_id] marker.translation = markers_tvecs[i][0] - marker.rotation, _ = cv.Rodrigues(markers_rvecs[i][0]) + marker.rotation, _ = cv2.Rodrigues(markers_rvecs[i][0]) marker.size = size marker.points = markers_points.reshape(4, 3).dot(marker.rotation) - marker.translation @@ -328,15 +281,15 @@ class ArUcoDetector(DataFeatures.PipelineStepObject): """ # detect markers from gray picture - gray = cv.cvtColor(image, cv.COLOR_BGR2GRAY) - detected_markers_corners, detected_markers_ids, _ = aruco.detectMarkers(gray, self.__dictionary.markers, + gray = cv2.cvtColor(image, cv2.COLOR_BGR2GRAY) + detected_markers_corners, detected_markers_ids, _ = cv2.aruco.detectMarkers(gray, self.__dictionary.markers, parameters=self.__parameters.internal) # if all board markers are detected if len(detected_markers_corners) == expected_markers_number: self.__board = board - self.__board_corners_number, self.__board_corners, self.__board_corners_ids = aruco.interpolateCornersCharuco( + self.__board_corners_number, self.__board_corners, self.__board_corners_ids = cv2.aruco.interpolateCornersCharuco( detected_markers_corners, detected_markers_ids, gray, self.__board.model) else: @@ -350,7 +303,7 @@ class ArUcoDetector(DataFeatures.PipelineStepObject): """Draw detected board corners in image.""" if self.__board is not None: - cv.drawChessboardCorners(image, ((self.__board.size[0] - 1), (self.__board.size[1] - 1)), + cv2.drawChessboardCorners(image, ((self.__board.size[0] - 1), (self.__board.size[1] - 1)), self.__board_corners, True) def board_corners_number(self) -> int: diff --git a/src/argaze/ArUcoMarker/ArUcoMarkerGroup.py b/src/argaze/ArUcoMarker/ArUcoMarkerGroup.py index 5575cad..8cd8043 100644 --- a/src/argaze/ArUcoMarker/ArUcoMarkerGroup.py +++ b/src/argaze/ArUcoMarker/ArUcoMarkerGroup.py @@ -149,7 +149,7 @@ class ArUcoMarkerGroup(DataFeatures.PipelineStepObject): new_marker = ArUcoMarker.ArUcoMarker(self.__dictionary, identifier, size) - # Build marker corners thanks to translation vector and rotation matrix + # Build marker corners considering translation vector and rotation matrix place_corners = numpy.array([[-size / 2, size / 2, 0], [size / 2, size / 2, 0], [size / 2, -size / 2, 0], [-size / 2, -size / 2, 0]]) place_corners = place_corners.dot(rmat) + tvec diff --git a/src/argaze/DataFeatures.py b/src/argaze/DataFeatures.py index 2629e8e..491d6ac 100644 --- a/src/argaze/DataFeatures.py +++ b/src/argaze/DataFeatures.py @@ -703,21 +703,20 @@ def PipelineStepExecutionTime(method): end = time.perf_counter() - # Check earlier call dates to calculate frequency - try: - - last_start, last_end = self._execution_times[method.__name__] - - if start > last_start: - - self._execution_frequencies[method.__name__] = 1 / (start - last_start) - - except KeyError: + # Create list to store method call dates and init call frequency + if method.__name__ not in self._execution_times.keys(): + self._execution_times[method.__name__] = [] self._execution_frequencies[method.__name__] = math.nan # Store start end end dates - self._execution_times[method.__name__] = (start, end) + self._execution_times[method.__name__].append((start, end)) + + # Remove call dates older than 1 second and count number of calls to get frequency + while self._execution_times[method.__name__][-1][0] - self._execution_times[method.__name__][0][0] > 1: + + self._execution_times[method.__name__].pop(0) + self._execution_frequencies[method.__name__] = len(self._execution_times[method.__name__]) return result @@ -1354,8 +1353,7 @@ class PipelineStepObject(): # Check execution time try: - start, end = self._execution_times[method_name] - t = end - start + t = numpy.mean(numpy.diff(self._execution_times[method_name])) except KeyError: diff --git a/src/argaze/GazeAnalysis/KCoefficient.py b/src/argaze/GazeAnalysis/KCoefficient.py index f9218cb..c6f303a 100644 --- a/src/argaze/GazeAnalysis/KCoefficient.py +++ b/src/argaze/GazeAnalysis/KCoefficient.py @@ -48,7 +48,7 @@ class ScanPathAnalyzer(GazeFeatures.ScanPathAnalyzer): for scan_step in scan_path: - durations.append(scan_step.duration) + durations.append(scan_step.fixation_duration) amplitudes.append(scan_step.last_saccade.amplitude) durations = numpy.array(durations) @@ -65,7 +65,7 @@ class ScanPathAnalyzer(GazeFeatures.ScanPathAnalyzer): Ks = [] for scan_step in scan_path: - Ks.append((abs(scan_step.duration - duration_mean) / duration_std) - (abs(scan_step.last_saccade.amplitude - amplitude_mean) / amplitude_std)) + Ks.append((abs(scan_step.fixation_duration - duration_mean) / duration_std) - (abs(scan_step.last_saccade.amplitude - amplitude_mean) / amplitude_std)) self.__K = numpy.array(Ks).mean() @@ -106,7 +106,7 @@ class AOIScanPathAnalyzer(GazeFeatures.AOIScanPathAnalyzer): for aoi_scan_step in aoi_scan_path: - durations.append(aoi_scan_step.duration) + durations.append(aoi_scan_step.fixation_duration) amplitudes.append(aoi_scan_step.last_saccade.amplitude) durations = numpy.array(durations) @@ -123,7 +123,7 @@ class AOIScanPathAnalyzer(GazeFeatures.AOIScanPathAnalyzer): Ks = [] for aoi_scan_step in aoi_scan_path: - Ks.append((abs(aoi_scan_step.duration - duration_mean) / duration_std) - (abs(aoi_scan_step.last_saccade.amplitude - amplitude_mean) / amplitude_std)) + Ks.append((abs(aoi_scan_step.fixation_duration - duration_mean) / duration_std) - (abs(aoi_scan_step.last_saccade.amplitude - amplitude_mean) / amplitude_std)) self.__K = numpy.array(Ks).mean() diff --git a/src/argaze/__main__.py b/src/argaze/__main__.py index 76e9664..e4363ca 100644 --- a/src/argaze/__main__.py +++ b/src/argaze/__main__.py @@ -24,10 +24,11 @@ import contextlib import time import os import stat +import math from . import load from .DataFeatures import SharedObjectBusy -from .ArFeatures import ArCamera, ArContext, PostProcessingContext, LiveProcessingContext +from .ArFeatures import ArCamera, ArContext, DataPlaybackContext, DataCaptureContext from .utils.UtilsFeatures import print_progress_bar import cv2 @@ -68,7 +69,7 @@ def load_context(args): # Blanck line info_stack += 1 - if issubclass(type(context), LiveProcessingContext): + if issubclass(type(context), DataCaptureContext): info_stack += 1 cv2.putText(image, f'Press Enter to start calibration', (int(width/4)+20, int(height/3)+(info_stack*40)), cv2.FONT_HERSHEY_SIMPLEX, 1, (255, 255, 255), 1, cv2.LINE_AA) @@ -76,7 +77,7 @@ def load_context(args): info_stack += 1 cv2.putText(image, f'Press r to start/stop recording', (int(width/4)+20, int(height/3)+(info_stack*40)), cv2.FONT_HERSHEY_SIMPLEX, 1, (255, 255, 255), 1, cv2.LINE_AA) - if issubclass(type(context), PostProcessingContext): + if issubclass(type(context), DataPlaybackContext): info_stack += 1 cv2.putText(image, f'Press Space bar to pause/resume processing', (int(width/4)+20, int(height/3)+(info_stack*40)), cv2.FONT_HERSHEY_SIMPLEX, 1, (255, 255, 255), 1, cv2.LINE_AA) @@ -181,7 +182,7 @@ def load_context(args): pass # Key interaction - key_pressed = cv2.waitKey(40) + key_pressed = cv2.waitKey( int(1000 / args.fps) ) #print("key_pressed", key_pressed) # f: disable/enable pipeline drawing @@ -199,8 +200,8 @@ def load_context(args): raise KeyboardInterrupt() - # Keys specific to live processing contexts - if issubclass(type(context), LiveProcessingContext): + # Keys specific to data capture contexts + if issubclass(type(context), DataCaptureContext): # Enter: start calibration if key_pressed == 13: @@ -222,10 +223,10 @@ def load_context(args): context.create_recording() context.start_recording() - # Keys specific to post processing contexts - if issubclass(type(context), PostProcessingContext): + # Keys specific to data playback contexts + if issubclass(type(context), DataPlaybackContext): - # Space bar: pause/resume pipeline processing + # Space bar: pause/resume data playback if key_pressed == 32: @@ -236,21 +237,11 @@ def load_context(args): else: context.pause() - - # Select previous image with left arrow - if key_pressed == 2: - - context.previous() - - # Select next image with right arrow - if key_pressed == 3: - - context.next() # Window mode off else: - if issubclass(type(context), PostProcessingContext): + if issubclass(type(context), DataPlaybackContext): prefix = f'Progression' suffix = f'| {int(context.progression*context.duration * 1e-3)}s in {int(time.time()-start_time)}s' @@ -261,7 +252,8 @@ def load_context(args): if issubclass(type(context.pipeline), ArCamera): watch_time, watch_freq = context.pipeline.execution_info('watch') - suffix += f' | Watch {int(watch_time)}ms at {watch_freq}Hz' + + suffix += f' | Watch {int(watch_time) if not math.isnan(watch_time) else 0}ms at {watch_freq if not math.isnan(watch_freq) else 0}Hz' # Clear old longer print suffix += ' ' @@ -331,6 +323,7 @@ parser_load.add_argument('context_file', metavar='CONTEXT_FILE', type=str, help= parser_load.add_argument('-v', '--verbose', action='store_true', default=False, help='enable verbose mode to print information in console') parser_load.add_argument('-p', '--pipe_path', metavar='PIPE_PATH', type=str, default=None, help='enable pipe communication to execute external commands') parser_load.add_argument('-x', '--display', metavar='DISPLAY', nargs="+", type=int, default=None, help='adapt windows to display dimension') +parser_load.add_argument('-f', '--fps', metavar='FPS', type=int, default=15, help='set window fps') parser_load.add_argument('--no-window', action='store_true', default=False, help='disable window mode') parser_load.set_defaults(func=load_context) diff --git a/src/argaze/utils/UtilsFeatures.py b/src/argaze/utils/UtilsFeatures.py index ce92e35..5dbc10c 100644 --- a/src/argaze/utils/UtilsFeatures.py +++ b/src/argaze/utils/UtilsFeatures.py @@ -155,11 +155,6 @@ class TimeProbe(): self.start() -def tuple_to_string(t: tuple, separator: str = ", ") -> str: - """Convert tuple elements into quoted strings separated by a separator string.""" - - return separator.join(f'\"{e}\"' for e in t) - def PrintCallStack(method): """Define a decorator to print call stack until the decorated method.""" @@ -230,37 +225,29 @@ class FileWriter(DataFeatures.PipelineStepObject): os.makedirs(self.__path.parent.absolute()) # Open file - self.__file = open(self.__path, 'w', encoding='utf-8', buffering=1) + self.__file = open(self.__path, 'w', encoding='utf-8', newline='', buffering=1) + self.__writer = csv.writer(self.__file, delimiter=self.__separator, quoting=csv.QUOTE_NONNUMERIC) # Write header if required if self.__header is not None: - # Format list or tuple element into quoted strings - if not isinstance(self.__header, str): - - self.__header = tuple_to_string(self.__header, self.__separator) - - print(self.__header, file=self.__file, flush=True) + self.__writer.writerow(self.__header) @DataFeatures.PipelineStepExit def __exit__(self, exception_type, exception_value, exception_traceback): """Close file.""" + self.__file.close() def write(self, data: str|tuple): - """Write data as a new line into file. + """Write data as a new line into file.""" - !!! note - Tuple elements are converted into quoted strings separated by separator string. - """ - - # Format list or tuple element into quoted strings - if not isinstance(data, str): - - data = tuple_to_string(data, self.__separator) + if self.__file.closed: + + return # Write into file - print(data, file=self.__file, flush=True) + self.__writer.writerow(data) class FileReader(DataFeatures.PipelineStepObject): """Read data from a file line by line.""" @@ -305,11 +292,7 @@ class FileReader(DataFeatures.PipelineStepObject): pass def read(self) -> str|tuple: - """Read next data from file. - - !!! note - Quoted strings separated by separator string are converted into tuple elements. - """ + """Read next data from file.""" try: @@ -443,7 +426,7 @@ class LookPerformanceRecorder(FileWriter): super().__init__(**kwargs) - self.header = "Timestamp (ms)", "Time (ms)", "Frequency (Hz)" + self.header = "Real time (ms)", "Frame timestamp (ms)", "Execution time (ms)", "Execution frequency (Hz)" self.__start_time = time.perf_counter() @@ -456,6 +439,7 @@ class LookPerformanceRecorder(FileWriter): log = ( (time.perf_counter() - self.__start_time) * 1e3, + timestamp, t * 1e3, f ) @@ -470,7 +454,7 @@ class WatchPerformanceRecorder(FileWriter): super().__init__(**kwargs) - self.header = "Timestamp (ms)", "Time (ms)", "Frequency (Hz)" + self.header = "Real time (ms)", "Camera timestamp (ms)", "Execution time (ms)", "Execution frequency (Hz)" self.__start_time = time.perf_counter() @@ -483,6 +467,7 @@ class WatchPerformanceRecorder(FileWriter): log = ( (time.perf_counter() - self.__start_time) * 1e3, + timestamp, t * 1e3, f ) diff --git a/src/argaze/utils/contexts/File.py b/src/argaze/utils/contexts/File.py new file mode 100644 index 0000000..69ec1b5 --- /dev/null +++ b/src/argaze/utils/contexts/File.py @@ -0,0 +1,435 @@ +"""Define eye tracking data file context""" + +""" +This program is free software: you can redistribute it and/or modify it under +the terms of the GNU General Public License as published by the Free Software +Foundation, either version 3 of the License, or (at your option) any later +version. +This program is distributed in the hope that it will be useful, but WITHOUT +ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS +FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. +You should have received a copy of the GNU General Public License along with +this program. If not, see <https://www.gnu.org/licenses/>. +""" + +__author__ = "Théo de la Hogue" +__credits__ = [] +__copyright__ = "Copyright 2023, Ecole Nationale de l'Aviation Civile (ENAC)" +__license__ = "GPLv3" + +import logging +import time +import math +import threading +import ast + +import pandas +import numpy + +from argaze import ArFeatures, DataFeatures, GazeFeatures +from argaze.utils import UtilsFeatures + + +class CSV(ArFeatures.DataPlaybackContext): + + @DataFeatures.PipelineStepInit + def __init__(self, **kwargs): + + # Init ArContext class + super().__init__() + + # Init private attributes + self.__path = None + self.__separator = ',' + + self.__timestamp_column = None + self.__x_column = None + self.__y_column = None + self.__xy_column = None + self.__left_eye_x_column = None + self.__left_eye_y_column = None + self.__left_eye_validity_column = None + self.__right_eye_x_column = None + self.__right_eye_y_column = None + self.__right_eye_validity_column = None + + self.__rescale_to_pipeline_size = False + + self.__start = math.nan + self.__end = math.nan + self.__duration = 0. + self.__progression = 0. + + @property + def path(self) -> str: + """Path to data file.""" + return self.__path + + @path.setter + def path(self, path: str): + + self.__path = path + + @property + def separator(self) -> str: + """Value delimiter character""" + return self.__separator + + @separator.setter + def separator(self, separator: str): + + self.__separator = separator + + @property + def timestamp_column(self) -> str: + """Timestamp column name in file. + !!! warning + This column name is mandatory. + """ + return self.__timestamp_column + + @timestamp_column.setter + def timestamp_column(self, timestamp_column: str): + + self.__timestamp_column = timestamp_column + + @property + def x_column(self) -> str: + """X coordinate column name. + !!! note + This column name is required in the case where gaze position coordinates are splitted in two separated columns. + """ + return self.__x_column + + @x_column.setter + def x_column(self, x_column: str): + + self.__x_column = x_column + + @property + def y_column(self) -> str: + """Y coordinate column name. + !!! note + This column name is required in the case where gaze position coordinates are splitted in two separated columns. + """ + return self.__y_column + + @y_column.setter + def y_column(self, y_column: str): + + self.__y_column = y_column + + @property + def xy_column(self) -> str: + """X and Y coordinate column name. + !!! note + This column name is required in the case where gaze position coordinates are joined as a list in one single column. + """ + return self.__xy_column + + @xy_column.setter + def xy_column(self, xy_column: str): + + self.__xy_column = xy_column + + @property + def left_eye_x_column(self) -> str: + """X coordinate for left eye column name. + !!! note + This column name is required in the case where gaze position coordinates and validity are given for each eye in six separated columns. + """ + return self.__left_eye_x_column + + @left_eye_x_column.setter + def left_eye_x_column(self, left_eye_x_column: str): + + self.__left_eye_x_column = left_eye_x_column + + @property + def left_eye_y_column(self) -> str: + """Y coordinate for left eye column name. + !!! note + This column name is required in the case where gaze position coordinates and validity are given for each eye in six separated columns. + """ + return self.__left_eye_y_column + + @left_eye_y_column.setter + def left_eye_y_column(self, left_eye_y_column: str): + + self.__left_eye_y_column = left_eye_y_column + + @property + def left_eye_validity_column(self) -> str: + """Validity of left eye coordinate column name. + !!! note + This column name is required in the case where gaze position coordinates and validity are given for each eye in six separated columns. + """ + return self.__left_eye_validity_column + + @left_eye_validity_column.setter + def left_eye_validity_column(self, left_eye_validity_column: str): + + self.__left_eye_validity_column = left_eye_validity_column + + @property + def right_eye_x_column(self) -> str: + """X coordinate for right eye column name. + !!! note + This column name is required in the case where gaze position coordinates and validity are given for each eye in six separated columns. + """ + return self.__right_eye_x_column + + @right_eye_x_column.setter + def right_eye_x_column(self, right_eye_x_column: str): + + self.__right_eye_x_column = right_eye_x_column + + @property + def right_eye_y_column(self) -> str: + """Y coordinate for right eye column name. + !!! note + This column name is required in the case where gaze position coordinates and validity are given for each eye in six separated columns. + """ + return self.__right_eye_y_column + + @right_eye_y_column.setter + def right_eye_y_column(self, right_eye_y_column: str): + + self.__right_eye_y_column = right_eye_y_column + + @property + def right_eye_validity_column(self) -> str: + """Validity of right eye coordinate column name. + !!! note + This column name is required in the case where gaze position coordinates and validity are given for each eye in six separated columns. + """ + return self.__right_eye_validity_column + + @right_eye_validity_column.setter + def right_eye_validity_column(self, right_eye_validity_column: str): + + self.__right_eye_validity_column = right_eye_validity_column + + @property + def rescale_to_pipeline_size(self) -> bool: + """Rescale gaze positions to pipeline size.""" + return self.__rescale_to_pipeline_size + + @rescale_to_pipeline_size.setter + def rescale_to_pipeline_size(self, rescale: bool): + + self.__rescale_to_pipeline_size = rescale + + @property + def start(self) -> int|float: + """Start reading timestamp.""" + return self.__start + + @start.setter + def start(self, start: int|float): + + self.__start = start + + @property + def end(self) -> int|float: + """End reading timestamp.""" + return self.__end + + @end.setter + def end(self, end: int|float): + + self.__end = end + + @property + def duration(self) -> int|float: + """Get data duration.""" + + return self.__duration + + @property + def progression(self) -> float: + """Get data processing progression between 0 and 1.""" + + return self.__progression + + @DataFeatures.PipelineStepEnter + def __enter__(self): + + logging.info('CSV file context starts...') + + # Select data to load from CSV file + data_columns = [] + data_types = {} + data_converters = {} + + # Select timestamp column + if self.__timestamp_column: + + data_columns.append(self.__timestamp_column) + data_types[self.__timestamp_column] = numpy.float64 + + else: + + logging.error('Missing timestamp column name') + + # Case where gaze position coordinates are splitted in two separated columns + if self.__x_column and self.__y_column: + + data_columns.append(self.__x_column) + data_types[self.__x_column] = numpy.float64 + + data_columns.append(self.__y_column) + data_types[self.__y_column] = numpy.float64 + + # Case where gaze position coordinates are joined as a list in one single column + elif self.__xy_column: + + data_columns.append(self.__xy_column) + data_converters[self.__xy_column] = ast.literal_eval + + # Case where gaze position coordinates and validity are given for each eye in six separated columns. + elif self.__left_eye_x_column and self.__left_eye_y_column and self.__left_eye_validity_column and self.__right_eye_x_column and self.__right_eye_y_column and self.__right_eye_validity_column: + + data_columns.append(self.__left_eye_x_column) + data_types[self.__left_eye_x_column] = numpy.float64 + + data_columns.append(self.__left_eye_y_column) + data_types[self.__left_eye_y_column] = numpy.float64 + + data_columns.append(self.__left_eye_validity_column) + data_types[self.__left_eye_validity_column] = numpy.bool_ + + data_columns.append(self.__right_eye_x_column) + data_types[self.__right_eye_x_column] = numpy.float64 + + data_columns.append(self.__right_eye_y_column) + data_types[self.__right_eye_y_column] = numpy.float64 + + data_columns.append(self.__right_eye_validity_column) + data_types[self.__right_eye_validity_column] = numpy.bool_ + + dataframe = pandas.read_csv(self.__path, delimiter = self.__separator, low_memory = False, usecols=data_columns, dtype=data_types, converters=data_converters) + + # Optionnaly select a time range + if not math.isnan(self.start): + + dataframe = dataframe.loc[(dataframe[self.__timestamp_column] >= self.start)] + + if not math.isnan(self.end): + + dataframe = dataframe.loc[(dataframe[self.__timestamp_column] <= self.end)] + + # Transform dataframe to a get timestamp, x, y, validity columns + + # First, rename timestamp column + dataframe.rename(columns={self.__timestamp_column: 'timestamp'}, inplace=True) + + # Case where gaze position coordinates are splitted in two separated columns + if self.__x_column and self.__y_column: + + dataframe.rename(columns={self.__x_column: 'x',self.__y_column: 'y'}, inplace=True) + + # Case where gaze position coordinates are joined as a list in one single column + elif self.__xy_column: + + dataframe[['x','y']] = pandas.DataFrame(dataframe[self.__xy_column].to_list(), columns=['x','y']) + + # Case where gaze position coordinates and validity are given for each eye in six separated columns. + elif self.__left_eye_x_column and self.__left_eye_y_column and self.__left_eye_validity_column and self.__right_eye_x_column and self.__right_eye_y_column and self.__right_eye_validity_column: + + # Edit gaze position X coordinate as the mean of left and right eyes positions if both are valid else select the valid one + dataframe['x'] = numpy.where( + dataframe[self.__left_eye_validity_column] & dataframe[self.__right_eye_validity_column], + (dataframe[self.__left_eye_x_column] + dataframe[self.__right_eye_x_column]) / 2, + numpy.where( + dataframe[self.__left_eye_validity_column], + dataframe[self.__left_eye_x_column], + numpy.where( + dataframe[self.__right_eye_validity_column], + dataframe[self.__right_eye_x_column], + None + ) + ) + ) + + # Edit gaze position Y coordinate as the mean of left and right eyes positions if both are valid else select the valid one + dataframe['y'] = numpy.where( + dataframe[self.__left_eye_validity_column] & dataframe[self.__right_eye_validity_column], + (dataframe[self.__left_eye_y_column] + dataframe[self.__right_eye_y_column]) / 2, + numpy.where( + dataframe[self.__left_eye_validity_column], + dataframe[self.__left_eye_y_column], + numpy.where( + dataframe[self.__right_eye_validity_column], + dataframe[self.__right_eye_y_column], + None + ) + ) + ) + + # Mark unvalid gaze positions + dataframe[['validity']] = pandas.DataFrame(dataframe['x'].notna() & dataframe['y'].notna()) + unvalid_count = len(dataframe[dataframe['validity'] == False]) + + if unvalid_count: + logging.info('%i unvalid gaze positions have been detected', unvalid_count) + + # Scale valid gaze positions to pipeline size + if self.__rescale_to_pipeline_size: + + dataframe.loc[dataframe['validity'], 'x'] *= self.pipeline.size[0] + dataframe.loc[dataframe['validity'], 'y'] *= self.pipeline.size[1] + + logging.info('gaze positions have been scaled to pipeline size') + + # Open reading thread + self.__reading_thread = threading.Thread(target=self.__read, kwargs={'dataframe': dataframe}) + + logging.debug('> starting reading thread...') + self.__reading_thread.start() + + @DataFeatures.PipelineStepExit + def __exit__(self, exception_type, exception_value, exception_traceback): + + logging.info('CSV file context stops...') + + # Close data stream + self.stop() + + # Stop reading thread + threading.Thread.join(self.__reading_thread) + + def __read(self, dataframe: pandas.DataFrame): + """Read and process gaze positions from dataframe.""" + + # Setup start and end dates + start_ts = dataframe.iloc[0].timestamp if math.isnan(self.start) else self.start + end_ts = dataframe.iloc[-1].timestamp if math.isnan(self.end) else self.end + + self.__duration = end_ts - start_ts + self.__progression = 0. + + logging.info('Reading %i gaze positions from %f to %f', len(dataframe), start_ts, end_ts) + + for index, row in dataframe.iterrows(): + + # Stop reading + if not self.is_running(): + + break + + # Pause reading + while self.is_paused() and self.is_running(): + + time.sleep(0.1) + + # Process gaze position + self._process_gaze_position(x = row['x'], y = row['y'], timestamp = row['timestamp']) + + # Update progression + self.__progression = (row['timestamp'] - start_ts) / self.__duration + + # Wait to get a realtime replay + # TODO: Add attribute to disable realtime replay + # TODO: Consider gaze position processing time to adapt waiting time + time.sleep(1e-3) diff --git a/src/argaze/utils/contexts/OpenCV.py b/src/argaze/utils/contexts/OpenCV.py index 273705a..908f91d 100644 --- a/src/argaze/utils/contexts/OpenCV.py +++ b/src/argaze/utils/contexts/OpenCV.py @@ -27,7 +27,7 @@ from argaze import ArFeatures, DataFeatures class Cursor(ArFeatures.ArContext): - """Process cursor position over OpenCV window. + """Capture cursor position over OpenCV window. !!! warning It is assumed that an OpenCV window with the same name than the context is used to display context's pipeline image. @@ -36,7 +36,7 @@ class Cursor(ArFeatures.ArContext): @DataFeatures.PipelineStepInit def __init__(self, **kwargs): - # Init LiveProcessingContext class + # Init DataCaptureContext class super().__init__() @DataFeatures.PipelineStepEnter @@ -74,8 +74,8 @@ class Cursor(ArFeatures.ArContext): self._process_gaze_position(timestamp = int((time.time() - self._start_time) * 1e3), x = x, y = y) -class Movie(Cursor): - """Process movie images and cursor position over OpenCV window. +class Movie(Cursor, ArFeatures.DataPlaybackContext): + """Playback movie images and capture cursor position over OpenCV window. !!! warning It is assumed that an OpenCV window with the same name than the context is used to display context's pipeline image. @@ -134,45 +134,35 @@ class Movie(Cursor): def __read(self): """Iterate on movie images.""" - # Init image selection - _, current_image = self.__movie.read() - current_image_time = self.__movie.get(cv2.CAP_PROP_POS_MSEC) - self.__next_image_index = 0 #int(self.__start * self.__movie_fps) - - while not self._stop_event.is_set(): + while self.is_running(): # Check pause event (and stop event) - while self._pause_event.is_set() and not self._stop_event.is_set(): + while self.is_paused() and self.is_running(): logging.debug('> reading is paused at %i', current_image_time) time.sleep(1) - # Select a new image and detect markers once - if self.__next_image_index != self.__current_image_index or self.__refresh: - - self.__movie.set(cv2.CAP_PROP_POS_FRAMES, self.__next_image_index) - - success, image = self.__movie.read() + # Read image + success, image = self.__movie.read() - if success: + if success: - video_height, video_width, _ = image.shape + # Refresh once + self.__refresh = False - # Refresh once - self.__refresh = False + #self.__current_image_index = self.__movie.get(cv2.CAP_PROP_POS_FRAMES) - 1 + current_image_time = self.__movie.get(cv2.CAP_PROP_POS_MSEC) - self.__current_image_index = self.__movie.get(cv2.CAP_PROP_POS_FRAMES) - 1 - current_image_time = self.__movie.get(cv2.CAP_PROP_POS_MSEC) + # Timestamp image + image = DataFeatures.TimestampedImage(image, timestamp=current_image_time) - # Timestamp image - image = DataFeatures.TimestampedImage(image, timestamp=current_image_time) + # Process movie image + self._process_camera_image(timestamp=current_image_time, image=image) - # Process movie image - self._process_camera_image(timestamp=current_image_time, image=image) - - # Wait - time.sleep(1 / self.__movie_fps) + # Wait for half frame time + # TODO: Consider camera image processing time to adapt waiting time + time.sleep(0.5 / self.__movie_fps) @DataFeatures.PipelineStepExit def __exit__(self, exception_type, exception_value, exception_traceback): @@ -182,33 +172,12 @@ class Movie(Cursor): # Exit from Cursor context super().__exit__(exception_type, exception_value, exception_traceback) - # Close data stream + # Close data capture self.stop() # Stop reading thread threading.Thread.join(self.__reading_thread) - def refresh(self): - """Refresh current frame.""" - self.__refresh = True - - def previous(self): - """Go to previous frame.""" - self.__next_image_index -= 1 - - # Clip image index - if self.__next_image_index < 0: - self.__next_image_index = 0 - - def next(self): - """Go to next frame.""" - - self.__next_image_index += 1 - - # Clip image index - if self.__next_image_index < 0: - self.__next_image_index = 0 - @property def duration(self) -> int|float: """Get movie duration.""" @@ -217,7 +186,7 @@ class Movie(Cursor): @property def progression(self) -> float: - """Get movie processing progression between 0 and 1.""" + """Get movie playback progression between 0 and 1.""" if self.__current_image_index is not None: @@ -225,4 +194,93 @@ class Movie(Cursor): else: - return 0.
\ No newline at end of file + return 0. + +class Camera(Cursor, ArFeatures.DataCaptureContext): + """Capture camera images and capture cursor position over OpenCV window. + + !!! warning + It is assumed that an OpenCV window with the same name than the context is used to display context's pipeline image. + """ + @DataFeatures.PipelineStepInit + def __init__(self, **kwargs): + + # Init Cursor class + super().__init__() + + # Init private attributes + self.__camera_id = None + self.__camera = None + self.__video_fps = None + self.__video_width = None + self.__video_height = None + + @property + def identifier(self) -> int: + """Camera device id.""" + return self.__camera_id + + @identifier.setter + def identifier(self, camera_id: int): + + self.__camera_id = camera_id + + # Load movie + self.__camera = cv2.VideoCapture(self.__camera_id) + self.__video_fps = self.__camera.get(cv2.CAP_PROP_FPS) + self.__video_width = int(self.__camera.get(cv2.CAP_PROP_FRAME_WIDTH)) + self.__video_height = int(self.__camera.get(cv2.CAP_PROP_FRAME_HEIGHT)) + + @DataFeatures.PipelineStepEnter + def __enter__(self): + + logging.info('OpenCV.Camera context starts...') + + # Enter in Cursor context + super().__enter__() + + # Open reading thread + self.__reading_thread = threading.Thread(target=self.__read) + + logging.debug('> starting reading thread...') + self.__reading_thread.start() + + return self + + def __read(self): + """Iterate on camera images.""" + + while self.is_running(): + + # Check pause event (and stop event) + while self.is_paused() and self.is_running(): + + logging.debug('> reading is paused at %i', current_image_time) + + time.sleep(1) + + # Select a new image + success, image = self.__camera.read() + image_time = self.__camera.get(cv2.CAP_PROP_POS_MSEC) + + if success: + + # Timestamp image + image = DataFeatures.TimestampedImage(image, timestamp=image_time) + + # Process movie image + self._process_camera_image(timestamp=image_time, image=image) + + @DataFeatures.PipelineStepExit + def __exit__(self, exception_type, exception_value, exception_traceback): + + logging.info('OpenCV.Camera context stops...') + + # Exit from Cursor context + super().__exit__(exception_type, exception_value, exception_traceback) + + # Close data capture + self.stop() + + # Stop reading thread + threading.Thread.join(self.__reading_thread) diff --git a/src/argaze/utils/contexts/PupilLabs.py b/src/argaze/utils/contexts/PupilLabsInvisible.py index d5a4319..5c9a138 100644 --- a/src/argaze/utils/contexts/PupilLabs.py +++ b/src/argaze/utils/contexts/PupilLabsInvisible.py @@ -21,6 +21,7 @@ __license__ = "GPLv3" import sys import logging import time + import threading from dataclasses import dataclass @@ -33,17 +34,17 @@ import cv2 from pupil_labs.realtime_api.simple import discover_one_device -class LiveStream(ArFeatures.ArContext): +class LiveStream(ArFeatures.DataCaptureContext): @DataFeatures.PipelineStepInit def __init__(self, **kwargs): - # Init ArContext class + # Init DataCaptureContext class super().__init__() def __enter__(self): - logging.info('Pupil-Labs Device connexion starts...') + logging.info('Pupil-Labs Invisible connexion starts...') # Init timestamp self.__start_time = time.time() @@ -76,9 +77,9 @@ class LiveStream(ArFeatures.ArContext): def __stream_gaze(self): """Stream gaze.""" - logging.debug('Stream gaze from Pupil Device') + logging.debug('Stream gaze from Pupil Invisible') - while not self._stop_event.is_set(): + while self.is_running(): try: while True: @@ -107,9 +108,9 @@ class LiveStream(ArFeatures.ArContext): def __stream_video(self): """Stream video.""" - logging.debug('Stream video from Pupil Device') + logging.debug('Stream video from Pupil Invisible') - while not self._stop_event.is_set(): + while self.is_running(): try: while True: @@ -132,7 +133,7 @@ class LiveStream(ArFeatures.ArContext): logging.debug('Pupil-Labs context stops...') # Close data stream - self._stop_event.set() + self.stop() # Stop streaming threading.Thread.join(self.__gaze_thread) diff --git a/src/argaze/utils/contexts/PupilLabsNeon.py b/src/argaze/utils/contexts/PupilLabsNeon.py new file mode 100644 index 0000000..e7d1f47 --- /dev/null +++ b/src/argaze/utils/contexts/PupilLabsNeon.py @@ -0,0 +1,140 @@ +"""Handle network connection to Pupil Labs devices. Tested with Pupil Neon. + Based on Pupil Labs' Realtime Python API.""" + +""" +This program is free software: you can redistribute it and/or modify it under +the terms of the GNU General Public License as published by the Free Software +Foundation, either version 3 of the License, or (at your option) any later +version. +This program is distributed in the hope that it will be useful, but WITHOUT +ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS +FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. +You should have received a copy of the GNU General Public License along with +this program. If not, see <https://www.gnu.org/licenses/>. +""" + +__author__ = "Damien Mouratille" +__credits__ = [] +__copyright__ = "Copyright 2024, Ecole Nationale de l'Aviation Civile (ENAC)" +__license__ = "GPLv3" + +import sys +import logging +import time + +import threading +from dataclasses import dataclass + +from argaze import ArFeatures, DataFeatures, GazeFeatures +from argaze.utils import UtilsFeatures + +import numpy +import cv2 + +from pupil_labs.realtime_api.simple import discover_one_device + + +class LiveStream(ArFeatures.DataCaptureContext): + + @DataFeatures.PipelineStepInit + def __init__(self, **kwargs): + + # Init DataCaptureContext class + super().__init__() + + def __enter__(self): + + logging.info('Pupil-Labs Neon connexion starts...') + + # Init timestamp + self.__start_time = time.time() + + # Look for devices. Returns as soon as it has found the first device. + self.__device = discover_one_device(max_search_duration_seconds=10) + + if self.__device is None: + logging.info('No device found. Exit!') + raise SystemExit(-1) + else: + logging.info('Device found. Stream loading.') + + # Open gaze stream + self.__gaze_thread = threading.Thread(target=self.__stream_gaze) + + logging.debug('> starting gaze thread...') + + self.__gaze_thread.start() + + # Open video stream + self.__video_thread = threading.Thread(target=self.__stream_video) + + logging.debug('> starting video thread...') + + self.__video_thread.start() + + return self + + def __stream_gaze(self): + """Stream gaze.""" + + logging.debug('Stream gaze from Pupil Neon') + + while self.is_running(): + + try: + while True: + gaze = self.__device.receive_gaze_datum() + + gaze_timestamp = int((gaze.timestamp_unix_seconds - self.__start_time) * 1e3) + + logging.debug('Gaze received at %i timestamp', gaze_timestamp) + + # When gaze position is valid + if gaze.worn is True: + + self._process_gaze_position( + timestamp=gaze_timestamp, + x=int(gaze.x), + y=int(gaze.y)) + else: + # Process empty gaze position + logging.debug('Not worn at %i timestamp', gaze_timestamp) + + self._process_gaze_position(timestamp=gaze_timestamp) + + except KeyboardInterrupt: + pass + + def __stream_video(self): + """Stream video.""" + + logging.debug('Stream video from Pupil Neon') + + while self.is_running(): + + try: + while True: + scene_frame, frame_datetime = self.__device.receive_scene_video_frame() + + scene_timestamp = int((frame_datetime - self.__start_time) * 1e3) + + logging.debug('Video received at %i timestamp', scene_timestamp) + + self._process_camera_image( + timestamp=scene_timestamp, + image=scene_frame) + + except KeyboardInterrupt: + pass + + @DataFeatures.PipelineStepExit + def __exit__(self, exception_type, exception_value, exception_traceback): + + logging.debug('Pupil-Labs context stops...') + + # Close data stream + self.stop() + + # Stop streaming + threading.Thread.join(self.__gaze_thread) + threading.Thread.join(self.__video_thread) diff --git a/src/argaze/utils/contexts/TobiiProGlasses2.py b/src/argaze/utils/contexts/TobiiProGlasses2.py index 7f45f32..21843a0 100644 --- a/src/argaze/utils/contexts/TobiiProGlasses2.py +++ b/src/argaze/utils/contexts/TobiiProGlasses2.py @@ -330,12 +330,12 @@ class TobiiJsonDataParser(): return MarkerPosition(data['marker3d'], data['marker2d']) -class LiveStream(ArFeatures.LiveProcessingContext): +class LiveStream(ArFeatures.DataCaptureContext): @DataFeatures.PipelineStepInit def __init__(self, **kwargs): - # Init LiveProcessingContext class + # Init DataCaptureContext class super().__init__() # Init private attributes @@ -599,6 +599,12 @@ class LiveStream(ArFeatures.LiveProcessingContext): logging.debug('> starting battery status thread...') self.__check_battery_thread.start() + # Init calibration status + self.__calibration_status = 'uncalibrated' + + # Init recording status + self.__recording_status = 'stopped' + return self @DataFeatures.PipelineStepExit @@ -629,7 +635,6 @@ class LiveStream(ArFeatures.LiveProcessingContext): threading.Thread.join(self.__video_thread) - def __make_socket(self): """Create a socket to enable network communication.""" @@ -742,15 +747,15 @@ class LiveStream(ArFeatures.LiveProcessingContext): # Check image validity if image is None: - # Wait for half frame time - time.sleep(2 / self.__video_fps) + # Wait 1ms + time.sleep(1e-3) continue # Check image time validity if image.time is None: - # Wait for half frame time - time.sleep(2 / self.__video_fps) + # Wait 1ms + time.sleep(1e-3) continue # Store first timestamp @@ -786,9 +791,6 @@ class LiveStream(ArFeatures.LiveProcessingContext): while not self._stop_event.is_set(): - # Wait for half frame time - time.sleep(2 / self.__video_fps) - # Lock buffer access with self.__video_buffer_lock: @@ -812,6 +814,9 @@ class LiveStream(ArFeatures.LiveProcessingContext): # Clear buffer self.__video_buffer = None + # Wait 1ms + time.sleep(1e-3) + def __keep_alive(self): """Maintain network connection.""" @@ -931,7 +936,7 @@ class LiveStream(ArFeatures.LiveProcessingContext): """Handle whole Tobii glasses calibration process.""" # Reset calibration - self.__calibration_status = None + self.__calibration_status = 'uncalibrated' self.__calibration_id = None # Calibration have to be done for a project and a participant @@ -975,6 +980,11 @@ class LiveStream(ArFeatures.LiveProcessingContext): self.__calibration_id = None def get_calibration_status(self) -> str: + """Get calibration status. + + Returns: + status: 'calibrating', 'calibrated', 'stale', 'uncalibrated' or 'failed' string + """ return self.__calibration_status @@ -984,7 +994,7 @@ class LiveStream(ArFeatures.LiveProcessingContext): """Create a new recording on the Tobii interface's SD Card.""" # Reset recording - self.__recording_status = None + self.__recording_status = 'stopped' self.__recording_id = None # Recording have to be done for a participant @@ -1028,6 +1038,11 @@ class LiveStream(ArFeatures.LiveProcessingContext): self.__recording_status = self.__wait_for_recording_status(self.__recording_id, ['paused']) def get_recording_status(self) -> str: + """Get recording status. + + Returns: + status: 'init', 'starting', 'recording', 'pausing', 'paused', 'stopping', 'stopped', 'done', 'stale' or 'failed' string + """ return self.__recording_status @@ -1062,9 +1077,9 @@ class LiveStream(ArFeatures.LiveProcessingContext): @DataFeatures.PipelineStepImage def image(self, **kwargs): """ - Get pipeline image with live processing information. + Get pipeline image with data capture information. """ - logging.debug('LiveProcessingContext.image %s', self.name) + logging.debug('DataCaptureContext.image %s', self.name) image = super().image(**kwargs) height, width, _ = image.shape @@ -1072,7 +1087,7 @@ class LiveStream(ArFeatures.LiveProcessingContext): # Display calibration status calibration_panel = ((int(width/2), 0), (width, 50)) - if self.__calibration_status is None: + if self.__calibration_status == 'uncalibrated': cv2.rectangle(image, calibration_panel[0], calibration_panel[1], (0, 0, 0), -1) cv2.putText(image, 'Calibration required', (calibration_panel[0][0]+20, calibration_panel[0][1]+40), cv2.FONT_HERSHEY_SIMPLEX, 1, (0, 255, 255), 1, cv2.LINE_AA) @@ -1085,7 +1100,7 @@ class LiveStream(ArFeatures.LiveProcessingContext): elif self.__calibration_status != 'calibrated': cv2.rectangle(image, calibration_panel[0], calibration_panel[1], (0, 0, 127), -1) - cv2.putText(image, f'Calibration {calibration_status}', (calibration_panel[0][0]+20, calibration_panel[0][1]+40), cv2.FONT_HERSHEY_SIMPLEX, 1, (255, 255, 255), 1, cv2.LINE_AA) + cv2.putText(image, f'Calibration {self.__calibration_status}', (calibration_panel[0][0]+20, calibration_panel[0][1]+40), cv2.FONT_HERSHEY_SIMPLEX, 1, (255, 255, 255), 1, cv2.LINE_AA) else: @@ -1110,7 +1125,7 @@ class LiveStream(ArFeatures.LiveProcessingContext): cv2.putText(image, f'Battery {self.__battery_level}%', (width - 220, 40), cv2.FONT_HERSHEY_SIMPLEX, 1, text_color, 1, cv2.LINE_AA) # Display recording status - if self.__recording_status is None: + if self.__recording_status == 'stopped': circle_color = (0, 0, 0) @@ -1126,7 +1141,7 @@ class LiveStream(ArFeatures.LiveProcessingContext): return image -class PostProcessing(ArFeatures.PostProcessingContext): +class SegmentPlayback(ArFeatures.DataPlaybackContext): @DataFeatures.PipelineStepInit def __init__(self, **kwargs): @@ -1165,6 +1180,7 @@ class PostProcessing(ArFeatures.PostProcessingContext): self.__sync_event_unit = None self.__sync_event_factor = None self.__sync_data_ts = None + self.__sync_video_ts = None self.__sync_ts = None self.__last_sync_data_ts = None self.__last_sync_ts = None @@ -1297,8 +1313,22 @@ class PostProcessing(ArFeatures.PostProcessingContext): logging.debug('> read image at %i timestamp', video_ts) - # Process camera image - self._process_camera_image(timestamp=video_ts, image=video_image) + # if sync is required + if self.__sync_event is not None: + + # Wait for a first sync event + if self.__sync_ts is not None: + + self.__sync_video_ts = int(self.__sync_ts + video_ts - self.__sync_data_ts) + + # Process camera image + self._process_camera_image(timestamp=self.__sync_video_ts, image=video_image) + + # Otherwise, always process images + elif self.__sync_event is None: + + # Process camera image + self._process_camera_image(timestamp=video_ts, image=video_image) height, width, _ = video_image.shape @@ -1343,15 +1373,17 @@ class PostProcessing(ArFeatures.PostProcessingContext): logging.info('Difference between data and sync event timestamps is %i ms', diff_data_ts-diff_sync_ts) - # Don't process gaze positions if sync is required but sync event not happened yet - if self.__sync_event is not None and self.__sync_ts is None: + # Don't process gaze positions when: + # - no image have been processed yet + # - no sync event happened yet + if self.__sync_video_ts is None or self.__sync_ts is None: - continue + continue - # Otherwise, synchronize timestamp with sync event - elif self.__sync_event is not None and self.__sync_ts is not None: + # Otherwise, synchronize timestamp with sync event + else: - data_ts = int(self.__sync_ts + data_ts - self.__sync_data_ts) + data_ts = int(self.__sync_ts + data_ts - self.__sync_data_ts) # Process gaze positions match data_object_type: @@ -1501,7 +1533,15 @@ class PostProcessing(ArFeatures.PostProcessingContext): raise StopIteration # Parse data - data_object, data_object_type = self.__parser.parse_data(status, data) + try: + + data_object, data_object_type = self.__parser.parse_data(status, data) + + except Exception as e: + + logging.error('%s while parsing livedata.json.gz at %i timestamp', e, ts) + + return self.__next_data() # Return millisecond timestamp, data object and type return ts * 1e-3, data_object, data_object_type @@ -1514,6 +1554,6 @@ class PostProcessing(ArFeatures.PostProcessingContext): @property def progression(self) -> float: - """Get data processing progression between 0 and 1.""" + """Get data playback progression between 0 and 1.""" return self.__progression
\ No newline at end of file diff --git a/src/argaze/utils/contexts/TobiiProGlasses3.py b/src/argaze/utils/contexts/TobiiProGlasses3.py new file mode 100644 index 0000000..a53c095 --- /dev/null +++ b/src/argaze/utils/contexts/TobiiProGlasses3.py @@ -0,0 +1,128 @@ +"""Handle network connection to Tobii Pro G3 devices. + Based on Tobii Realtime Python API. + g3pylib must be installed. +""" + +""" +This program is free software: you can redistribute it and/or modify it under +the terms of the GNU General Public License as published by the Free Software +Foundation, either version 3 of the License, or (at your option) any later +version. +This program is distributed in the hope that it will be useful, but WITHOUT +ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS +FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. +You should have received a copy of the GNU General Public License along with +this program. If not, see <https://www.gnu.org/licenses/>. + +""" + +__author__ = "Damien Mouratille" +__credits__ = [] +__copyright__ = "Copyright 2024, Ecole Nationale de l'Aviation Civile (ENAC)" +__license__ = "GPLv3" + +import sys +import logging +import time +import dill +import threading +from dataclasses import dataclass +import numpy +import cv2 +import asyncio +import os + +from argaze import ArFeatures, DataFeatures, GazeFeatures +from argaze.utils import UtilsFeatures + + +from g3pylib import connect_to_glasses + + +class LiveStream(ArFeatures.DataCaptureContext): + + @DataFeatures.PipelineStepInit + def __init__(self, **kwargs): + + # Init DataCaptureContext class + super().__init__() + + def __enter__(self): + + logging.info('Tobii Pro G3 connexion starts...') + + # Init timestamp + self.__start_time = time.time() + + self.__loop = asyncio.new_event_loop() + self.__loop.run_until_complete(self.__stream_rtsp()) + + return self + + async def __stream_rtsp(self): + """Stream video and gaze.""" + + logging.info('Stream gaze from Tobii Pro G3') + + while self.is_running(): + + try: + async with connect_to_glasses.with_zeroconf(True,10000) as g3: + async with g3.stream_rtsp(scene_camera=True, gaze=True) as streams: + async with streams.gaze.decode() as gaze_stream, streams.scene_camera.decode() as scene_stream: + while True: + frame, frame_timestamp = await scene_stream.get() + gaze, gaze_timestamp = await gaze_stream.get() + while gaze_timestamp is None or frame_timestamp is None: + if frame_timestamp is None: + frame, frame_timestamp = await scene_stream.get() + if gaze_timestamp is None: + gaze, gaze_timestamp = await gaze_stream.get() + while gaze_timestamp < frame_timestamp: + gaze, gaze_timestamp = await gaze_stream.get() + while gaze_timestamp is None: + gaze, gaze_timestamp = await gaze_stream.get() + + scene_frame = frame.to_ndarray(format="bgr24") + + gaze_timestamp = int((gaze_timestamp - self.__start_time) * 1e3) + + logging.debug('Gaze received at %i timestamp', gaze_timestamp) + + # If given gaze data + if "gaze2d" in gaze: + gaze2d = gaze["gaze2d"] + # Convert rational (x,y) to pixel location (x,y) + h, w = scene_frame.shape[:2] + gaze_scene = (int(gaze2d[0] * w), int(gaze2d[1] * h)) + + + self._process_gaze_position( + timestamp=gaze_timestamp, + x=gaze_scene[0], + y=gaze_scene[1]) + else: + # Process empty gaze position + logging.debug('Not worn at %i timestamp', gaze_timestamp) + + scene_timestamp = int((frame_timestamp - self.__start_time) * 1e3) + + logging.debug('Video received at %i timestamp', scene_timestamp) + + self._process_camera_image( + timestamp=scene_timestamp, + image=scene_frame) + + except KeyboardInterrupt: + pass + + + + @DataFeatures.PipelineStepExit + def __exit__(self, exception_type, exception_value, exception_traceback): + + logging.debug('Tobii Pro G3 context stops...') + + # Close data stream + self.stop() + diff --git a/src/argaze/utils/contexts/__init__.py b/src/argaze/utils/contexts/__init__.py index 19b7533..c427de0 100644 --- a/src/argaze/utils/contexts/__init__.py +++ b/src/argaze/utils/contexts/__init__.py @@ -1,4 +1,4 @@ """ -Collection of device interfaces. +Collection of contexts. """ -__all__ = ['TobiiProGlasses2'] +__all__ = ['File','OpencCV','PupilLabsInvisible','PupilLabsNeon','Random','TobiiProGlasses2','TobiiProGlasses3'] diff --git a/src/argaze/utils/demo/aoi_2d_scene.json b/src/argaze/utils/demo/aoi_2d_scene.json index ac58b63..76ff1bc 100644 --- a/src/argaze/utils/demo/aoi_2d_scene.json +++ b/src/argaze/utils/demo/aoi_2d_scene.json @@ -1,18 +1,18 @@ { - "BlueTriangle":[[960, 664], [1113, 971], [806, 971]], + "BlueTriangle":[[602, 415], [697, 607], [506, 607]], "RedSquare": { "Rectangle": { - "x": 268, - "y": 203, - "width": 308, - "height": 308 + "x": 170, + "y": 127, + "width": 191, + "height": 191 } }, "GreenCircle": { "Circle": { - "cx": 1497, - "cy": 356, - "radius": 153 + "cx": 937, + "cy": 223, + "radius": 95 } } }
\ No newline at end of file diff --git a/src/argaze/utils/demo/aruco_markers_pipeline.json b/src/argaze/utils/demo/aruco_markers_pipeline.json index f29111b..11db858 100644 --- a/src/argaze/utils/demo/aruco_markers_pipeline.json +++ b/src/argaze/utils/demo/aruco_markers_pipeline.json @@ -6,7 +6,7 @@ "aruco_detector": { "dictionary": "DICT_APRILTAG_16h5", "parameters": { - "useAruco3Detection": 1 + "useAruco3Detection": true } }, "sides_mask": 420, @@ -56,7 +56,7 @@ }, "frames": { "GrayRectangle": { - "size": [1920, 1149], + "size": [1200, 720], "background": "frame_background.jpg", "gaze_movement_identifier": { "argaze.GazeAnalysis.DispersionThresholdIdentification.GazeMovementIdentifier": { @@ -67,11 +67,35 @@ "scan_path": { "duration_max": 10000 }, + "scan_path_analyzers": { + "argaze.GazeAnalysis.Basic.ScanPathAnalyzer": {}, + "argaze.GazeAnalysis.KCoefficient.ScanPathAnalyzer": {}, + "argaze.GazeAnalysis.NearestNeighborIndex.ScanPathAnalyzer": { + "size": [1200, 720] + }, + "argaze.GazeAnalysis.ExploreExploitRatio.ScanPathAnalyzer": { + "short_fixation_duration_threshold": 0 + } + }, "layers": { "demo_layer": { "aoi_scene": "aoi_2d_scene.json", "aoi_matcher": { "argaze.GazeAnalysis.FocusPointInside.AOIMatcher": {} + }, + "aoi_scan_path": { + "duration_max": 10000 + }, + "aoi_scan_path_analyzers": { + "argaze.GazeAnalysis.Basic.AOIScanPathAnalyzer": {}, + "argaze.GazeAnalysis.TransitionMatrix.AOIScanPathAnalyzer": {}, + "argaze.GazeAnalysis.KCoefficient.AOIScanPathAnalyzer": {}, + "argaze.GazeAnalysis.LempelZivComplexity.AOIScanPathAnalyzer": {}, + "argaze.GazeAnalysis.NGram.AOIScanPathAnalyzer": { + "n_min": 3, + "n_max": 3 + }, + "argaze.GazeAnalysis.Entropy.AOIScanPathAnalyzer":{} } } }, @@ -116,17 +140,7 @@ } } } - }, - "angle_tolerance": 15.0, - "distance_tolerance": 2.54 - } - }, - "observers": { - "argaze.utils.UtilsFeatures.LookPerformanceRecorder": { - "path": "_export/records/look_performance.csv" - }, - "argaze.utils.UtilsFeatures.WatchPerformanceRecorder": { - "path": "_export/records/watch_performance.csv" + } } } } diff --git a/src/argaze/utils/demo/csv_file_context_left_right_eyes.json b/src/argaze/utils/demo/csv_file_context_left_right_eyes.json new file mode 100644 index 0000000..6450801 --- /dev/null +++ b/src/argaze/utils/demo/csv_file_context_left_right_eyes.json @@ -0,0 +1,15 @@ +{ + "argaze.utils.contexts.File.CSV": { + "name": "CSV file data playback", + "path": "./src/argaze/utils/demo/gaze_positions_left_right_eyes.csv", + "timestamp_column": "Timestamp (ms)", + "left_eye_x_column": "Left eye X", + "left_eye_y_column": "Left eye Y", + "left_eye_validity_column": "Left eye validity", + "right_eye_x_column": "Right eye X", + "right_eye_y_column": "Right eye Y", + "right_eye_validity_column": "Right eye validity", + "rescale_to_pipeline_size": true, + "pipeline": "gaze_analysis_pipeline.json" + } +}
\ No newline at end of file diff --git a/src/argaze/utils/demo/csv_file_context_xy_joined.json b/src/argaze/utils/demo/csv_file_context_xy_joined.json new file mode 100644 index 0000000..2d32b6d --- /dev/null +++ b/src/argaze/utils/demo/csv_file_context_xy_joined.json @@ -0,0 +1,9 @@ +{ + "argaze.utils.contexts.File.CSV" : { + "name": "CSV file data playback", + "path": "./src/argaze/utils/demo/gaze_positions_xy_joined.csv", + "timestamp_column": "Timestamp (ms)", + "xy_column": "Gaze Position (px)", + "pipeline": "gaze_analysis_pipeline.json" + } +}
\ No newline at end of file diff --git a/src/argaze/utils/demo/csv_file_context_xy_splitted.json b/src/argaze/utils/demo/csv_file_context_xy_splitted.json new file mode 100644 index 0000000..87fce4d --- /dev/null +++ b/src/argaze/utils/demo/csv_file_context_xy_splitted.json @@ -0,0 +1,10 @@ +{ + "argaze.utils.contexts.File.CSV" : { + "name": "CSV file data playback", + "path": "./src/argaze/utils/demo/gaze_positions_xy_splitted.csv", + "timestamp_column": "Timestamp (ms)", + "x_column": "Gaze Position X (px)", + "y_column": "Gaze Position Y (px)", + "pipeline": "gaze_analysis_pipeline.json" + } +}
\ No newline at end of file diff --git a/src/argaze/utils/demo/gaze_analysis_pipeline.json b/src/argaze/utils/demo/gaze_analysis_pipeline.json index 8b8212e..814bf87 100644 --- a/src/argaze/utils/demo/gaze_analysis_pipeline.json +++ b/src/argaze/utils/demo/gaze_analysis_pipeline.json @@ -1,7 +1,7 @@ { "argaze.ArFeatures.ArFrame": { "name": "GrayRectangle", - "size": [1920, 1149], + "size": [1200, 720], "background": "frame_background.jpg", "gaze_movement_identifier": { "argaze.GazeAnalysis.DispersionThresholdIdentification.GazeMovementIdentifier": { @@ -17,7 +17,7 @@ "argaze.GazeAnalysis.Basic.ScanPathAnalyzer": {}, "argaze.GazeAnalysis.KCoefficient.ScanPathAnalyzer": {}, "argaze.GazeAnalysis.NearestNeighborIndex.ScanPathAnalyzer": { - "size": [1920, 1149] + "size": [1200, 720] }, "argaze.GazeAnalysis.ExploreExploitRatio.ScanPathAnalyzer": { "short_fixation_duration_threshold": 0 @@ -126,8 +126,8 @@ }, "recorders.FrameImageRecorder": { "path": "_export/records/video.mp4", - "width": 1920, - "height": 1080, + "width": 1200, + "height": 720, "fps": 15 } } diff --git a/src/argaze/utils/demo/gaze_positions_left_right_eyes.csv b/src/argaze/utils/demo/gaze_positions_left_right_eyes.csv new file mode 100644 index 0000000..27f470e --- /dev/null +++ b/src/argaze/utils/demo/gaze_positions_left_right_eyes.csv @@ -0,0 +1,10001 @@ +"Timestamp (ms)","Left eye X","Left eye Y","Left eye validity","Right eye X","Right eye Y","Right eye validity"
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diff --git a/src/argaze/utils/demo/opencv_camera_context.json b/src/argaze/utils/demo/opencv_camera_context.json new file mode 100644 index 0000000..b280c73 --- /dev/null +++ b/src/argaze/utils/demo/opencv_camera_context.json @@ -0,0 +1,7 @@ +{ + "argaze.utils.contexts.OpenCV.Camera" : { + "name": "OpenCV camera", + "identifier": 0, + "pipeline": "aruco_markers_pipeline.json" + } +}
\ No newline at end of file diff --git a/src/argaze/utils/demo/opencv_movie_context.json b/src/argaze/utils/demo/opencv_movie_context.json index f7da7ee..930a0fc 100644 --- a/src/argaze/utils/demo/opencv_movie_context.json +++ b/src/argaze/utils/demo/opencv_movie_context.json @@ -1,6 +1,6 @@ { "argaze.utils.contexts.OpenCV.Movie" : { - "name": "OpenCV Window", + "name": "OpenCV movie", "path": "./src/argaze/utils/demo/tobii_record/segments/1/fullstream.mp4", "pipeline": "aruco_markers_pipeline.json" } diff --git a/src/argaze/utils/demo/pupillabs_invisible_live_stream_context.json b/src/argaze/utils/demo/pupillabs_invisible_live_stream_context.json new file mode 100644 index 0000000..3418de6 --- /dev/null +++ b/src/argaze/utils/demo/pupillabs_invisible_live_stream_context.json @@ -0,0 +1,6 @@ +{ + "argaze.utils.contexts.PupilLabsInvisible.LiveStream" : { + "name": "PupilLabs Invisible", + "pipeline": "aruco_markers_pipeline.json" + } +}
\ No newline at end of file diff --git a/src/argaze/utils/demo/pupillabs_live_stream_context.json b/src/argaze/utils/demo/pupillabs_live_stream_context.json deleted file mode 100644 index bcb7263..0000000 --- a/src/argaze/utils/demo/pupillabs_live_stream_context.json +++ /dev/null @@ -1,6 +0,0 @@ -{ - "argaze.utils.contexts.PupilLabs.LiveStream" : { - "name": "PupilLabs", - "pipeline": "aruco_markers_pipeline.json" - } -}
\ No newline at end of file diff --git a/src/argaze/utils/demo/pupillabs_neon_live_stream_context.json b/src/argaze/utils/demo/pupillabs_neon_live_stream_context.json new file mode 100644 index 0000000..a87c30e --- /dev/null +++ b/src/argaze/utils/demo/pupillabs_neon_live_stream_context.json @@ -0,0 +1,6 @@ +{ + "argaze.utils.contexts.PupilLabsNeon.LiveStream" : { + "name": "PupilLabs Neon", + "pipeline": "aruco_markers_pipeline.json" + } +}
\ No newline at end of file diff --git a/src/argaze/utils/demo/random_context.json b/src/argaze/utils/demo/random_context.json index 7f33579..62abb91 100644 --- a/src/argaze/utils/demo/random_context.json +++ b/src/argaze/utils/demo/random_context.json @@ -1,7 +1,7 @@ { "argaze.utils.contexts.Random.GazePositionGenerator" : { "name": "Random gaze position generator", - "range": [1920, 1149], + "range": [1200, 720], "pipeline": "gaze_analysis_pipeline.json" } }
\ No newline at end of file diff --git a/src/argaze/utils/demo/recorders.py b/src/argaze/utils/demo/recorders.py index 82022ce..979eaff 100644 --- a/src/argaze/utils/demo/recorders.py +++ b/src/argaze/utils/demo/recorders.py @@ -43,7 +43,7 @@ class FixationRecorder(UtilsFeatures.FileWriter): log = ( timestamp, - frame.last_gaze_movement().focus, + frame.last_gaze_movement().focus.value, frame.last_gaze_movement().duration, frame.layers['demo_layer'].last_looked_aoi_name() ) @@ -117,61 +117,3 @@ class AOIScanPathAnalysisRecorder(UtilsFeatures.FileWriter): ) self.write(log) - - -class ArUcoMarkersPoseRecorder(DataFeatures.PipelineStepObject): - - @DataFeatures.PipelineStepInit - def __init__(self, **kwargs): - - # Init private attributes - self.__output_folder = None - self.__size = None - - @property - def output_folder(self) -> str: - """folder path where to write ArUco markers pose.""" - return self.__output_folder - - @output_folder.setter - def output_folder(self, output_folder: str): - - self.__output_folder = output_folder - - @property - def size(self) -> float: - """Expected size in centimeters of detected markers.""" - return self.__output_folder - - @size.setter - def size(self, size: float): - - self.__size = size - - @property - def ids(self) -> list: - """Ids of markers to estimate pose (default all).""" - return self.__ids - - @ids.setter - def ids(self, ids: list): - - self.__ids = ids - - def on_detect_markers(self, timestamp, aruco_detector, exception): - - logging.info('%s writes estimated markers pose into %s', DataFeatures.get_class_path(self), self.__output_folder) - - if self.__size is not None: - - # Estimate all detected markers pose - aruco_detector.estimate_markers_pose(self.__size, ids = self.__ids) - - # Build ArUco markers group from detected markers - aruco_markers_group = ArUcoMarkerGroup.ArUcoMarkerGroup(dictionary=aruco_detector.dictionary, places=aruco_detector.detected_markers()) - - if self.__output_folder is not None: - - # Write ArUco markers group - aruco_markers_group.to_obj(f'{self.__output_folder}/{int(timestamp)}-aruco_markers_group.obj') -
\ No newline at end of file diff --git a/src/argaze/utils/demo/tobii_live_stream_context.json b/src/argaze/utils/demo/tobii_g2_live_stream_context.json index 6950617..6950617 100644 --- a/src/argaze/utils/demo/tobii_live_stream_context.json +++ b/src/argaze/utils/demo/tobii_g2_live_stream_context.json diff --git a/src/argaze/utils/demo/tobii_post_processing_context.json b/src/argaze/utils/demo/tobii_g2_segment_playback_context.json index 7a73512..d481b23 100644 --- a/src/argaze/utils/demo/tobii_post_processing_context.json +++ b/src/argaze/utils/demo/tobii_g2_segment_playback_context.json @@ -1,6 +1,6 @@ { - "argaze.utils.contexts.TobiiProGlasses2.PostProcessing" : { - "name": "Tobii Pro Glasses 2 post-processing", + "argaze.utils.contexts.TobiiProGlasses2.SegmentPlayback" : { + "name": "Tobii Pro Glasses 2 segment playback", "segment": "./src/argaze/utils/demo/tobii_record/segments/1", "pipeline": "aruco_markers_pipeline.json" } diff --git a/src/argaze/utils/demo/tobii_g3_live_stream_context.json b/src/argaze/utils/demo/tobii_g3_live_stream_context.json new file mode 100644 index 0000000..20f6ab1 --- /dev/null +++ b/src/argaze/utils/demo/tobii_g3_live_stream_context.json @@ -0,0 +1,6 @@ +{ + "argaze.utils.contexts.TobiiProGlasses3.LiveStream" : { + "name": "Tobii Pro Glasses 3 live stream", + "pipeline": "aruco_markers_pipeline.json" + } +}
\ No newline at end of file diff --git a/src/argaze/utils/estimate_markers_pose/observers.py b/src/argaze/utils/estimate_markers_pose/observers.py index 88da4f9..bbca1ad 100644 --- a/src/argaze/utils/estimate_markers_pose/observers.py +++ b/src/argaze/utils/estimate_markers_pose/observers.py @@ -18,6 +18,8 @@ __copyright__ = "Copyright 2023, Ecole Nationale de l'Aviation Civile (ENAC)" __license__ = "GPLv3" import logging +import os +import pathlib from argaze import DataFeatures from argaze.ArUcoMarker import ArUcoMarkerGroup @@ -41,7 +43,11 @@ class ArUcoMarkersPoseRecorder(DataFeatures.PipelineStepObject): @output_folder.setter def output_folder(self, output_folder: str): - self.__output_folder = output_folder + self.__output_folder = pathlib.Path(output_folder) + + if not os.path.exists(self.__output_folder.absolute()): + + os.makedirs(self.__output_folder.absolute()) def on_detect_markers(self, timestamp, aruco_detector, exception): diff --git a/src/argaze/utils/estimate_markers_pose/pipeline.json b/src/argaze/utils/estimate_markers_pose/pipeline.json index 2e0ab76..c16cce3 100644 --- a/src/argaze/utils/estimate_markers_pose/pipeline.json +++ b/src/argaze/utils/estimate_markers_pose/pipeline.json @@ -7,7 +7,7 @@ "pose_size": 4, "pose_ids": [], "parameters": { - "useAruco3Detection": 1 + "useAruco3Detection": true }, "observers":{ "observers.ArUcoMarkersPoseRecorder": { diff --git a/utils/processTobiiRecords.sh b/utils/processTobiiRecords.sh index 0cc3eb4..aca1543 100644 --- a/utils/processTobiiRecords.sh +++ b/utils/processTobiiRecords.sh @@ -1,31 +1,39 @@ #! /bin/bash # -# Load json ArGaze context file ($1) then, look for all Tobii record segments into input folder ($2). +# Look for all Tobii record segments into input folder ($1) to execute an ArGaze context file ($2) on each. # -# For each Tobii record segment found: -# - context "segment" field is modified to bind on it, -# - context "pipeline" field is modified to bind on a temporary patched pipeline \ -# resulting from the merging of the given pipeline and an optionnal "patch.json" file in Tobii record segment, -# - then, ArGaze executes the modified context from output folder ($3) to export all records into it, -# - finally, context is resetted and temporary patched pipeline is removed. +# For each Tobii record segment found a temporary context and pipeline files are created: +# - temporary context "segment" field is modified to bind on it, +# - temporary context "pipeline" field is modified to bind on a temporary pipeline file, +# - temporary pipeline "projection_cache" field is added to create or bind a "layers_projection.csv" file in segment folder, +# — if a "patch.json" file exist in the Tobii record segment, it merged to the temporary pipeline file, +# - then, ArGaze executes the temporary context from output folder ($3) to export all records into it, +# - finally, temporary context and pipeline files are deleted. # # Arguments: -# $1: ArGaze context file -# $2: folder from where to look for Tobii records -# $3: folder where to export ArGaze processing outputs +# $1: folder from where to look for Tobii records +# $2: ArGaze context file +# $3: folder where to export processing outputs +# $4+: any other arguments are passed to "argaze load" command ####################################### -# Check required arguments -if [ "$#" -ne 3 ]; then - echo "!!! Incorrect number of arguments" - exit 1 -fi +# Parse mandatory arguments +input_folder="$(realpath "$1")" +context_file="$(realpath "$2")" +output_folder="$(realpath "$3")" + +# Parse any other arguments to pass them to "argaze load" command +if [ $# -ge 4 ]; then -context_file=$1 -input_folder=$2 -output_folder=$3 + argaze_args=$4 -# Check requirements: + while shift && [ -n "$4" ]; do + argaze_args="${argaze_args},$4" + done + +fi + +# Check requirements if brew ls --versions jq > /dev/null; then : # jq installed else @@ -33,32 +41,7 @@ else brew install jq fi -# Check context ctx_folder="$(dirname "$context_file")" -ctx_class=$(jq "keys[0]" $context_file) -ctx_name=$(jq .$ctx_class.name $context_file) -ctx_segment=$(jq .$ctx_class.segment $context_file) -pipeline_file=$(jq -r .$ctx_class.pipeline $context_file) - -echo "*** Loading $ctx_class context:" -echo "- Name: $ctx_name" - -# Move to context folder -cd $ctx_folder - -# Check pipeline -if [ -f "$pipeline_file" ]; then - - ppl_class=$(jq "keys[0]" $pipeline_file) - ppl_name=$(jq .$ppl_class.name $pipeline_file) - echo "- Pipeline: $ppl_name" - -else - - echo "!!! Missing $pipeline_file pipeline file" - exit 1 - -fi ####################################### # Process Tobii segment folder @@ -78,55 +61,68 @@ function process_segment() { echo " - Lenght: $seg_length" echo " - Calibration: $ca_state" + # Move to context folder + cd $ctx_folder + + # Create temporary context file + temp_context_file=".$rec_id-$seg_id.context.json" + yes | cp -f $context_file $temp_context_file + ctx_class=$(jq "keys[0]" $temp_context_file) + ctx_name=$(jq .$ctx_class.name $temp_context_file) + ctx_pipeline=$(jq -r .$ctx_class.pipeline $temp_context_file) + + echo "- Context $(basename $temp_context_file):" + echo " - Name: $ctx_name" + + # Create temporary pipeline file + temp_pipeline_file=".$rec_id-$seg_id.pipeline.json" + yes | cp -f $ctx_pipeline $temp_pipeline_file + ppl_class=$(jq "keys[0]" $temp_pipeline_file) + ppl_name=$(jq .$ppl_class.name $temp_pipeline_file) + + echo "- Pipeline: $(basename $temp_pipeline_file)" + echo " - Name: $ppl_name" + + # Modify temporary context segment + echo "$(jq --tab ".$ctx_class.segment = \"$seg_folder\"" $temp_context_file)" > "$ctx_folder/$temp_context_file" + + # Modify temporary context pipeline + echo "$(jq --tab ".$ctx_class.pipeline = \"$temp_pipeline_file\"" $temp_context_file)" > "$ctx_folder/$temp_context_file" + + # Modify temporary pipeline projection_cache + echo "$(jq --tab ".$ppl_class.projection_cache = \"$seg_folder/layers_projection.csv\"" $temp_pipeline_file)" > "$ctx_folder/$temp_pipeline_file" + # Check patch patch_file="$seg_folder/patch.json" if [ -f "$patch_file" ]; then - echo "+ Patch:" + echo " + Patch:" echo "$(jq . $patch_file)" - # Edit temporary patched pipeline - temp_file=".$rec_id-$seg_id.patch.json" - echo "$(jq --tab -s ".[0] * .[1]" $pipeline_file $patch_file)" > "$ctx_folder/$temp_file" - - # Modify context pipeline - echo "$(jq --tab ".$ctx_class.pipeline = \"$temp_file\"" $context_file)" > $context_file - - echo "*** $ctx_folder/$temp_file file created" + # Merge patch with temporary pipeline + echo "$(jq --tab -s ".[0] * .[1]" $temp_pipeline_file $patch_file)" > "$ctx_folder/$temp_pipeline_file" fi - # Modify context segment - echo "$(jq --tab ".$ctx_class.segment = \"$seg_folder\"" $context_file)" > $context_file - - # Create segment output folder then, move into + # Create segment output folder seg_output=$output_folder/$rec_id/segments/$seg_id mkdir -p $seg_output cd $seg_output - # Launch argaze with modified context - echo "*** ArGaze processing starts" + # Launch modified context with argaze load command + echo "*** ArGaze starts context" - python -m argaze load $context_file + python -m argaze load "$ctx_folder/$temp_context_file" $argaze_args - echo "*** ArGaze processing ends" + echo "*** ArGaze ends context" # Move back to context folder cd $ctx_folder - # Reset context segment - echo "$(jq --tab ".$ctx_class.segment = $ctx_segment" $context_file)" > $context_file + # Delete temporary context file + rm "$ctx_folder/$temp_context_file" - # Check temporary pipeline - if [ -f "$temp_file" ]; then - - # Delete temporary patched pipeline - rm "$ctx_folder/$temp_file" - - # Reset context pipeline - echo "$(jq --tab ".$ctx_class.pipeline = \"$pipeline_file\"" $context_file)" > $context_file - - echo "*** $ctx_folder/$temp_file file removed" - fi + # Delete temporary pipeline file + rm "$ctx_folder/$temp_pipeline_file" } ####################################### @@ -154,7 +150,7 @@ function process_record() { done } -echo "*** Looking for Tobii records into $2 folder" +echo "*** Looking for Tobii records into $1 folder" # Check if the path is directly a path to a record segment if [ -f "$input_folder/livedata.json.gz" ]; then |
